Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_19.20_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGACCTGGGCGTCGGTGGCCAGCACCAGGGTGGTCAGCAGGTCGTTGGCCAGACCCTGGGCCAGGCGCGCCAGCAGGTCGGCGGTGGCCGGGGCGATCA GCACCAGGTCAGCCCAGCGGGCCAGCTCGATGTGGCCCATGGCCGCCTCGGCGGCAGGGTCGAGCAGGTCGAGGTGGACCGGATGGCCGGACAGCGCCTG GAGGGTCAGCGGGGTGATGAATTCGCGACCGCCCTGGGTCATGACCACGCGCACCTCGGCGCCCTGGTCGCGCAGTCGGCGGATCAGCTCCGCGCTCTTG TAGGCAGCGATGCCGCCACCCACGCCGAGGACGATGCGTTTCCGATACAAGCGCTGCATAGCATTGCCTTAAACAGATGGTGGAAAGTTCGCCGACGCTG CCTGCCCAGGCCGGTCGCCGCTGGAAAAAAGAGCGGCTACGATAGCACAGCGCCCGCAGGGGAGCAGCGGGCGCAGGGCATTCCCAGGGAGGGTACGACG
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DNA Sequence for Gene |
>M905_RS0111505
ATGAGCATTCGCGATTGGCCCGCGGCCGAGCGTCCGCGGGAAAAACTGCTGGCCCAGGGGGCGGCCAGCCTGAGCGACGCCGAGCTGCTGGCGATCTTCC TGCGCACCGGGGTGGCTGGGCGCAGCGCGGTGGACCTGGCCCGCCAGCTGCTCGCCGAGTTCGGCAGCCTGCGCGCGCTGCTGGAGGCCGACCTGGCCAC CTTCAGCCGCCATCTGGGCCTCGGCGCGGCCAAGTACGCGCAGCTCCAGGCGGTGCTGGAAATGGCCCGCCGCCATCTGGCCGAGCGGCTGCGCCGGGAA TCCGCGCTGGAATCGCCGCAGGCGGTGCGCGACTACCTCAAGGCCTGCCTGCGCCACGAGCCCCACGAGGTGTTCGGCTGCCTGTTCCTCGACGCCCGGC ACCGGGTGCTGGCCTTCGAGGTGCTGTTCCGCGGCACCGTGGACGGCGCCAGCGTCTATCCCCGGCAGGTGATCAGGCGGGCCCTGCACCACAACGCGGC GGCGCTGATCCTCACCCATAACCACCCCTCGGGCGTCGCCGAGCCCAGCCAGGCGGATCTGCAGCTGACCCGCCGCCTCAAGGAGCTGCTGGCGCAGATC GACGTGCGCCTGCTGGACCACTTCGTGGTCGGCGACGGCGAGCCCCAGTCCATGGTCGAGCTGGGCTGGCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGCGTTTCACGGCGACCTTGGCGAAGTCCTGGCGGCCGAAGGGGCTGACCTGGTAGCCGCTGACTTCCTTGCGGGCCAGCACGCTGGCCTGGGGATGG GCCAGGGGCAGCCATAGCGCCTGCGCGCGGATGATCGCCTGCGCTTCCTTATATAGGCGGCTGCGTTCTTCGCGGTCGGTGCTGCGCTTGCCGGCGGCGA TCAGTCGGTCGAGGGCCGGGTCGCAGTAGCGCGCGAAGTTGGTGCCGGACTGCACCGCCGCGCAGGAGAACTGCGGGGTGAGGAAGTTGTCCGGGTCGCC GTTGTCGCCGGCCCAGCCCATGAACAGCAGGTCGTGTTCGCCGGCCTTGGCGCGACGGATCAGCTCTCCCCACTCGACCACGCGGATCTCCGCGCGGATG CCCACGTCGGCCAGGTCGGCCTGCAGCAGCTGGGCGCCCAGGCTGGGGTTGGGGTTGAGCAGGCTGCTCGACGGGCGGGTCCAGATGGTGGTGCTGAAGC
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Amino Acid Sequence |
>hypothetical protein
MSIRDWPAAERPREKLLAQGAASLSDAELLAIFLRTGVAGRSAVDLARQLLAEFGSLRALLEADLATFSRHLGLGAAKYAQLQAVLEMARRHLAERLRRE SALESPQAVRDYLKACLRHEPHEVFGCLFLDARHRVLAFEVLFRGTVDGASVYPRQVIRRALHHNAAALILTHNHPSGVAEPSQADLQLTRRLKELLAQI DVRLLDHFVVGDGEPQSMVELGWL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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