Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_18.19_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCGGGTCGCTCACCGTGGAATCCAGCACGCCGAGGTTCAGGGTGCCACGCAGCTCGCCCTTGAGCGCCGCGGCGTAGCGCTCGAAGCCCTCCAGCTCG CCGAGCAGACGCAGGGTCTCCTGGTGGAACAGCTCGCCCTTGCTGGTCAGGCTGAAGCCGCCGCGACCGCGATGGCAGAGGGTAATGCCGAGCTGGCTCT CCAGCTGGCTCATGTAGGTGCTGATCGCTGAAGTGGACAGGTTGAGCTCCTGCTGCGCGGCGGCGAAGCCCTGGTGGCGCACCACGGCGGCGAAGATGCG CAGCAGCTTGAGATCGGGCAGGGCGCTCTGCATGGGCGACTCCGGGCGAAAGGCGGACTGCGCTCCAACCTACCCCACGCCAGTTAGTTTAGAAATTCCT GAAGTGATTATTTTCCTCCGGCGATTTTTTCCCGGCGCGCGCCCGGCCAAGAATCCGCTCAACGACCTTTCAACAATCACAACAAACCGTGAGGCCAGCC
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DNA Sequence for Gene |
>M905_RS0111095
GTGGAAAAGACCTTCCATCAGCCCCTGGGCGGCAACGAAATGCCGCGCTTCGGCGGCATCGCCACCATGATGCGCCTGCCCTACATCCAGTCCGCCGAAG ACAAGCGCCAGCTGGATGCCGCCTTCGTCGGCGTGCCCCTGGACATCGGTACCTCGCTGCGCTCCGGCACCCGCTTCGGGCCGCGCGACATCCGCGCCCA GTCAGTGATGATCCGCCCCTACAACATGGCCACCGGCGCCGCGCCCTTCGACTCCCTCAACGTGGCCGACATCGGCGACGTGGCGATCAACACCTTCAAC CTGGCCGAGGCGGTGCGCATCATCGAGGCGGCCTACGACGAGATCCTCGACTACGGCATCAAGCCGCTGACCCTGGGCGGCGACCACACCATCACTCTGC CGATCCTCCGCGCCATCCACAGGAAGCACGGCAAGGTCGGGCTGGTCCACGTGGACGCCCACGCCGACGTCAACGACGAGATGTTCGGCGAGAAGATCGC CCACGGCACTACCTTCCGCCGCGCCGTGGAGGAAGGCCTGCTGGACTGCCAGCGGGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGACGAC TTCAACTGGAGTCGCCGCCAGGGCTTCCGTGTGGTGCAGGCCGAGGAGTGCTGGCACCGGTCCCTGGAGCCGCTGATGGCCGAGGTGCGCGAGAAGGTCG GCGGCGGGCCGGTGTACCTGTCCTTCGACATCGACGGCATCGACCCAGCCTGGGCGCCCGGCACCGGCACCCCGGAGATCGGTGGACTGACCACCATCCA GGGCATGGAAATCATCCGCGGCTGCCAGGGCCTGGACCTGGTCGGCTGCGACCTGGTGGAGGTTTCGCCGCCCTACGACACCACCGGCAGCACCTCGCTG CTCGGCGCCAATCTGCTGTACGAGATGCTCTGCGCTCTGCCCGGCGTGCAGCGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGCACTCACTGGTTGCACCCATAACAACAATCAGGGCCGCCCGGCGGCGGCCCGGACGCTGACTTGTCGGCCCTGCCGGAACCTGCCGCCAACCTGACG GGCGTCCCCCGGGAGAAACCATCATGTCGTCCAACCACGGGCCGCAGGCCATCACCCGCATCGAGACCTTCGGGGTGGAACAGATCCCCGACCACGAACG CCACGCTACCCCCCTAGACCTGTTCCGCCTGATCTTCGGCGGCGCCAACACCTTCGCCACCGCCGTGCTGGGCAGCTTTCCGGTGCTCTTCGGGCTGTCC TTCGAGGCCGGCCTCTGGGCGATCGTGCTGGGCGTCGTCGTCGGCTCGCTGATCCTCGCCCCCATGGGCCTGTTCGGCGCGCTGAACGGCACCAACAACG CGGTGTCCTCCGGCGCCCACTTCGGTGTGCACGGGCGCATCGTCGGCTCCTTCCTGTCGCTGCTCACCGCGGTAGCCTTCTTCTCGCTGTCGGTGTGGAG
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Amino Acid Sequence |
>agmatinase
MEKTFHQPLGGNEMPRFGGIATMMRLPYIQSAEDKRQLDAAFVGVPLDIGTSLRSGTRFGPRDIRAQSVMIRPYNMATGAAPFDSLNVADIGDVAINTFN LAEAVRIIEAAYDEILDYGIKPLTLGGDHTITLPILRAIHRKHGKVGLVHVDAHADVNDEMFGEKIAHGTTFRRAVEEGLLDCQRVVQIGLRAQGYTADD FNWSRRQGFRVVQAEECWHRSLEPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQGMEIIRGCQGLDLVGCDLVEVSPPYDTTGSTSL LGANLLYEMLCALPGVQRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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