Pseudomonas thermotolerans J53, M905_RS0109700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003725 | double-stranded RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF01300
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55821 | YrdC/RibB | IPR017945 | DHBP synthase RibB-like alpha/beta domain superfamily | 1 | 203 | 1.98E-63 |
| Pfam | PF01300 | Telomere recombination | IPR006070 | Threonylcarbamoyl-AMP synthase-like domain | 22 | 198 | 2.2E-43 |
| Gene3D | G3DSA:3.90.870.10 | DHBP synthase | - | - | 1 | 206 | 1.4E-66 |
| NCBIfam | TIGR00057 | JCVI: L-threonylcarbamoyladenylate synthase | IPR006070 | Threonylcarbamoyl-AMP synthase-like domain | 7 | 201 | 6.7E-62 |
| PANTHER | PTHR42828 | DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN | - | - | 3 | 205 | 1.0E-58 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.