Pseudomonas thermotolerans J53, M905_RS0109105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008460 dTDP-glucose 4,6-dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05246
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009225 nucleotide-sugar metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05246
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF16363 GDP-mannose 4,6 dehydratase IPR016040 NAD(P)-binding domain 6 329 7.4E-103
Gene3D G3DSA:3.40.50.720 - - - 4 327 0.0
CDD cd05246 dTDP_GD_SDR_e IPR005888 dTDP-glucose 4,6-dehydratase 3 337 0.0
PANTHER PTHR43000 DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED - - 2 344 6.7E-122
Gene3D G3DSA:3.90.25.10 - - - 202 336 0.0
NCBIfam TIGR01181 JCVI: dTDP-glucose 4,6-dehydratase IPR005888 dTDP-glucose 4,6-dehydratase 4 342 0.0
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 2 349 3.71E-100
FunFam G3DSA:3.40.50.720:FF:000108 dTDP-glucose 4,6-dehydratase - - 5 213 1.5E-96

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.