Pseudomonas thermotolerans J53, M905_RS0103850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_4.5_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTTCCGGCGCCGGCATGGAGATCCCGGACGGCGCCGAACTGCGCGAGGGGGCCTGGCACTACCAGCGCCGGATCCCGCCTCTGCAACCCCTGCGTCTGG GCCGTGCGCCTGAGGCCGGGGATTATCAACTGTGCCTCGACCGGCGTTGTCGCCCCCTGGGCGACTGGCTCGGCCCGCCACAAGCGGACCGGCCGGCGCT GGAACTCTGGAGCTGCGCGACCGGCTTCGGAGCGCCTGCCATGGACTAGGCTGCCGGTGCCATCCGCCTCGGCAGCCGGTCAGGGAACCCCCATGTGGCG CGAGCCCATGGGGGTTTCGTTCATTAGTGGGCGGCGTTCTCCATATTTGTAAATGATTTGTATTGACCCGCGCCGCGGCATCCTGCAAGAATATTATAGA TAATGATTAGCGTTTGCGAATTGGCGAGGGCCGTGCCCCGCGGCATTCAGTTGCCAATGGACTGCTGCTAGCCATCGATCGCGCAACAGGAGAGCTTCCC
DNA Sequence for Gene
>M905_RS0103850
TTGCAGAGCAGAATGCCCCCCCTCGCCGTGGCGCTCGTCGCGGCCTGCAGCTTCTCGTCGGCGCTGGCCGAGGAGGAGTCCGGCCAGCTGGAACTGGATG CCCTGACTGTCACCGCCAGCTCGGAGGCGAGTGCGCCGGACAGCTACCAGGCGCCGCCGAGCCGCGCCGCCACCGGTTTGAAGCTGACCCCGCGGCAGAC TCCGCAGGCGATGTCCACGGTCAGCCGCGCGCAGATCGAGGACTTCCGCCTCACCAGCATCAACGAGGCGCTGAAGTTCACCCCCGGGGTCACCGTCGAG TCGGTGGAGACCGACCGCACCTACTTCACCTCCCGCGGCTTCGACATCACCAACTTCCAGTTCGACGGGGTGGGCATTCCCTTCACCTGGGGCGGCCAGG AAGGCTCGCCGGACCTGGCGCCCTTCGAGCGCATCGAGGTGGTGCGCGGCGCCAACGGCCTGATGAGCGGCAGCGGCAACCCTTCGGCGACCGTCAACTT CGTGCGCAAGCGGCCCACCGCCGATCCCCTGGCGCGCATCGACCTCACCGCCGGCTCCTGGGACAAGAGGCGCATCGAGGCGGACGTTTCCGGGGCGCTG AGCGACGCCGGCAACGTCCGCGGCCGTGCGGTCTATGCCCACGAGAAGGGCAATTCCTACCTGGACCGCTACGCCTTGGAGAAGCACGTGTTCTACGGCG TGCTGGAAGCTGACCTGGGCGAGGCCACGGTGTTCAGCCTCGGCCACACGCTGAACGAGAGCCAGGCCGACAGCCCGATGTGGGGCGCGCTGCCGCTGTT CGACTCGCTGGGCCGTTCCACCCATCTGTCGCGCTCCACCAGCACGGCGGCCGACTGGGCCTGGTGGAACAACCAGGAAGGCCGCACCTTCGCCGAGCTG ACCCACAGCTTCGCCAACGACTGGCAGGCCAGGGGCACGCTCACCTACGTGAAGAAGGAGAGCGACTCCGCGCTGTTCTACGTGCTCGGCACCCCGGACG CCGCCACCGGACAGGGGCTGTCCGGCTACCCCTCGCTGTACGAGGGCGAGACCCGCCAGTGGCTGGCCGACCTGTCGCTCAGCGGGCCGCTCCGCCTCGC TGGCCGCGAGCACGAGCTGATGCTGGGCGCCAACTGGTACAAGTCGGAGGTGGAGGATCTGTCCTTCTACATCCCCGGCTTCTTCGTGCCGGTGCCGACG AAGGACATCTATGCCGGGGACTTCCCCAAGCCGGCCAGCTGGGTCAACCCCGACGGCGCCGAGTACGAGGACAGGCAGAAGAGCTTCTACACGGCGGCGC GCCTCAGCCTGAGCGACGCCCTGTCCCTGGTGCTGGGCGCCCGGGCCATCAAGCTGGAGACCAGCGGGCAGTCCTACGGGGTGGATCGGGCCCGCGAGGA TGACGACATCCTGCCCTATGCCGGGCTGGTCTACGACCTGAACGAGCAGTTCTCCGTGTACGCCAGCTACACCGAGATCTTCAACCCGCAGAAGGAGATG GGCGCCGACCTGCGCCGCCTCGACCCCATCGAGGGGGAGAACTACGAAGTGGGGATCAAGGGCGAGCTGTTCGACGGCCGGCTCAACGTCGCCGCGGCGG TGTTCCGCACCAAGCAGTCCAACGTGGCCGAGTCCCTCGGCTTCGACCTCGGCAGCGGCCAGCAGATCTACGAGGGCGTCGACTACCTGAGCGAAGGCTA CGAGCTGGAAGTCTCCGGCGAGCTGCTGCCGGGCCTGCAGGTGATGGGCGGCTACACCTTCGTGGACATCCAGAACGCTGACCACAGCCACGGTCGCACC TACGCGCCCAAGCATCTGCTGCGCGCCTCCACGGTCTACCGCCTGCCGCAGCTGCCGCAGCTGAAGGTCGGTGCCAACCTCAGCTGGCAGGACGACATTC ACCGCGAGGTGGGCCTGCCGGACGGCAGTACCGGGCGCGTCGAGCAGGACGCCTACGCCCTGGTCGGCCTGATGGCCAGCTACGACTTCGCCCCCAACTG GAGCCTGGCGGCCAACCTCAACAACCTGACCAACGAGAAGTACATCACCAGCCTGTACTGGGATCAGGGCTTCTACGGCGCGCCGCGCAACGCCAGCCTG ACCCTGAGCTGGAAGTACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCCGCCCCGGCGCCGGTCCGGGAAGGCCGGCGCTTAGAGGATCGGCGAGATCAGCCGGGCCACGCGCATGCCCAGCTGGCGCAGGCGGGCGATGTTCTG GTCGTCCTCCTCGCCGATCTCCACGGACCGGCTGAAGTCCTCCTCGAGCATGTCGCGGACCTGCCCGGCCAGCCCCGTGTCGTGGGTCAGCAGCATCACC TCGAAGTTCAGGCGAAACGAGCGGTTGTCCAGGTTGGCGCTGCCGATGGCGCAGCTGTCGTCGTCGATCAGCACCACTTTCTGGTGCAGGAAGCCCGGTT GGTAGCGGAACACGCGGATGCCTGCGCGTACCGCCTCGAAGGCGTACAGGCTGGAGGCGGCGTAGACGATGCGGTGGTCCGGGCGCCCGGGGATCAGGAT GCGCACGTCCACGCCGCGCAGCACCGCCAGGTGCAGGGCGGCGAACACCGCCTCGTCGGGGATGAAGTAGGGGGTGGTGATCCACAGTCGCTGGCGTGCC
Amino Acid Sequence
>TonB-dependent receptor
MQSRMPPLAVALVAACSFSSALAEEESGQLELDALTVTASSEASAPDSYQAPPSRAATGLKLTPRQTPQAMSTVSRAQIEDFRLTSINEALKFTPGVTVE SVETDRTYFTSRGFDITNFQFDGVGIPFTWGGQEGSPDLAPFERIEVVRGANGLMSGSGNPSATVNFVRKRPTADPLARIDLTAGSWDKRRIEADVSGAL SDAGNVRGRAVYAHEKGNSYLDRYALEKHVFYGVLEADLGEATVFSLGHTLNESQADSPMWGALPLFDSLGRSTHLSRSTSTAADWAWWNNQEGRTFAEL THSFANDWQARGTLTYVKKESDSALFYVLGTPDAATGQGLSGYPSLYEGETRQWLADLSLSGPLRLAGREHELMLGANWYKSEVEDLSFYIPGFFVPVPT KDIYAGDFPKPASWVNPDGAEYEDRQKSFYTAARLSLSDALSLVLGARAIKLETSGQSYGVDRAREDDDILPYAGLVYDLNEQFSVYASYTEIFNPQKEM GADLRRLDPIEGENYEVGIKGELFDGRLNVAAAVFRTKQSNVAESLGFDLGSGQQIYEGVDYLSEGYELEVSGELLPGLQVMGGYTFVDIQNADHSHGRT YAPKHLLRASTVYRLPQLPQLKVGANLSWQDDIHREVGLPDGSTGRVEQDAYALVGLMASYDFAPNWSLAANLNNLTNEKYITSLYWDQGFYGAPRNASL TLSWKY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site