Pseudomonas thermotolerans J53, M905_RS0103505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046983 protein dimerization activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd01007 PBP2_BvgS_HisK_like - - 39 259 3.67783E-50
Gene3D G3DSA:3.30.450.20 PAS domain - - 450 565 5.4E-16
SMART SM00086 pac_2 IPR001610 PAC motif 527 568 1.5
CDD cd16917 HATPase_UhpB-NarQ-NarX-like - - 705 790 1.24831E-29
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 335 444 4.34E-22
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 669 791 5.24E-19
SMART SM00086 pac_2 IPR001610 PAC motif 396 436 0.32
Pfam PF13426 PAS domain IPR000014 PAS domain 335 435 9.5E-11
Gene3D G3DSA:1.20.5.1930 - - - 566 655 1.3E-12
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 433 566 1.77E-16
Coils Coil Coil - - 291 318 -
PANTHER PTHR24421 NITRATE/NITRITE SENSOR PROTEIN NARX-RELATED - - 236 793 4.9E-65
CDD cd00130 PAS IPR000014 PAS domain 474 565 0.00875719
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 329 443 4.1E-12
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 475 575 9.2E-7
CDD cd00130 PAS IPR000014 PAS domain 342 433 1.26055E-5
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 664 792 4.7E-32
Gene3D G3DSA:3.40.190.10 - - - 31 258 9.4E-42
Pfam PF08447 PAS fold IPR013655 PAS fold-3 476 557 1.6E-10
Gene3D G3DSA:3.40.190.10 - - - 126 221 9.4E-42
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 43 261 6.63E-27
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 700 793 2.2E-11
SMART SM00091 pas_2 IPR000014 PAS domain 323 389 0.038
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 41 262 6.1E-4
SMART SM00091 pas_2 IPR000014 PAS domain 448 521 120.0
Coils Coil Coil - - 568 595 -
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 702 792 3.7E-9
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 44 260 2.9E-18
MobiDBLite mobidb-lite consensus disorder prediction - - 794 816 -
Gene3D G3DSA:3.30.450.20 PAS domain - - 323 449 5.9E-22
Pfam PF07730 Histidine kinase IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain 596 662 5.6E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.