Pseudomonas thermotolerans J53, M905_RS0102575
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_1.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGTGCTGGGCATCCTCTACGAGAGTTACGTGCATCCGCTGACCATCCTCTCCACGTTGCCCTCAGCAGGGGTAGGGGCGCTGCTGGCGATTCTCCTGG TCGGCGACCAGTTCAGCCTGATCTCGCTGCTCGGCCTGTTCCTGCTGATCGGCATCGTCAAGAAGAACGCCATCCTGATGATCGACCTGGCCCTGCAGCT GGAGCGCGAGAACGGCCTGCCGCCCGACGAGTCCATCCGCCAGGCCTGCCTGCAGCGCCTGCGGCCGATCCTGATGACCACCCTGGCGGCCATCCTCGGC GCCGTGCCGCTGCTGATCGGCGGCACCGAAGGCGCGGAGATGCGCCAGCCGCTGGGCCTGAGCATCGTCGGCGGGCTGATCCTCAGCCAGATCCTCACCC TCTACACCACCCCGGTGGTCTACCTCTACTTCGATCGCCTGCGCCACCGCTTCAACCGCTGGCGCGGCGTGAAGACCGATGCCGCACTGGATACGCCGCT
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| DNA Sequence for Gene |
>M905_RS0102575
ATGATTCCGCACGCCAAACCCTACCTGACCACCCTGGCCCTGGCGCTGGCCCTGAGCGCCTGCGCCGTCGGCCCCGACTACCAGCGCCCGGAGGTGGCCA GCAGCGCCGCCTTCCGCCAGGTCGAGGGCTGGAAGGCCGCCGCGCCGGCCGATGCGCTGCTCGGTGGCGAGTGGTGGAAGCTCTATGGCGACGAGGAGCT GAACCACCTGGTCGAGCGCCTGAACGCCAGCAACCAGAACCTGGCTAGCGCCGAGGCCCAGTACCGCCAGGCCAAGGCGCTGGTACGCGGCGCCCGGGCG TCCTTCTTCCCCAGCCTGGGCGCCGACGTGGGCGTGACCCGCTCGGGGCAGGGCAGCGGCAGCATCGGCAATGACAGCAATGCCAGCGCAGCCTCCAGCG TCTCCAAGAGCTACAACGCCAGCCTCGGAGTGAGCTGGGAGCTGGATCTCTGGGGACGCCTGCGTCGCCAGCTGGAAGGCGACAGCGCGAGCCTGGAGGC CAGCGCCGCCGATTTGGCCGCTGCGCGCCTGAGCTTGCAGGCGGAACTGGTGCAGAACTACCTGCAGCTGCGCGTACTGGACGAGCAGAAACGCCTGCTG GACGCCACCGTGAAGGCCTACCAGCGCTCCCTGAAACTCACCGAGAACCAGTACAAAGCCGGCATAGTGCCAAAGTCCGACGTCACCCAGGCGCGCACCC AGCTGAAAAGCACCGAAGCCCAGGCCATCGACCTGGAATACCAGCGTGCCCAGCTGGAGCATGCCATCGCCGTGCTGATCGGCGTGCCGCCGGCGGAGTT CCGCCTGGCCGAGGTGGAACGGGTGCCGGAGCTGCCCGAGGTGCCGGTGAGCGTGCCCTCGGCACTGCTCGAGCGACGCCCGGACATCGCCGCCGCCGAG CGCCGGGTGATGGCCGCCAACGCCTCGATCGGCGTGGAGAAGGCCGCCTACTTCCCCGACCTGACCCTGTCCGCCTCCGGCGGCTACCGCAGCGGCGCCC TGGACAACTGGATCAGCACGCCGAACCGCTTCTGGTCCATCGGCCCGGCCTTCGCCATGACCCTGTTCGACGGCGGCATCATCCGCTCCCGCGTCGAGCA GGCCGAGGCCAACTACGACCAGACCGTGGCCAGCTACCGGCAGACCGTGCTGGAAGGCTTCCGCGAGGTGGAGGACTACCTGATCCAGCTCAAGGTCTAC GAGCGCGAGGCCGAAGTGCAGCAGGAAGCCCTGGAGGCCGCCCGGGAATCCCTGCGGCTGATCGAGAACCAGTACAAGGCCGGCCACGTGGACTACAACA GCGTGGTCAGCGTGCAGACCAGCGCACTCGCCAACGAACGCTCCTTGCTCAGCCTGCGCGGCAACCGGCTGCTGGCCAGCGTGCAACTGATCGCCGCCCT GGGCGGAGGCTGGGACGCCAGCCAGCTGCAGGAAGAGCCGCAGATGCAGGTGTCGGAAAAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCAAGGCCAGGCTTGGCTTGGCGGAGGAGGGGTAGGGCGAGCATAGCCAGTGCCAGGGCCGTTAACTGACCGGAAGCGGACTCGTCGAGATCAGGGCTG CTCTGCAAGGGCGCAGCGGGCAAACCAGTCGAGAATGTCGTCCCTTTGCCGCTCGCTGTGGGGATGGGCCAGGAGCCCTTCCACCAAAAAGGTCGCCACC GTGGCCAGTGTCCGCGCCCGCTCGTGGCTGATGCCCCTGGCTTGCAGGACGTGGACCACTGCAGCCTCCATGCCCTGGTGAAAGCGCTCATGCCAGTCTC GGATCACCGTAGACTGACTCAGTCGACCGTGCACCGTATTGACCAGCGGCCGGCTCTTTTCGAACTGCCGTAGCGCCCAGTCCATCTGCTCCCTGGGGTG CAGCCCCATGATGGCGGGCAGCTGCCGGAGGCTCTCGGCGAGCAGGCGATTGAGCACGCCGACCAGCAGCTCGTCCTTGCTGCCGTAGTACCAATACAGA
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| Amino Acid Sequence |
>RND transporter
MIPHAKPYLTTLALALALSACAVGPDYQRPEVASSAAFRQVEGWKAAAPADALLGGEWWKLYGDEELNHLVERLNASNQNLASAEAQYRQAKALVRGARA SFFPSLGADVGVTRSGQGSGSIGNDSNASAASSVSKSYNASLGVSWELDLWGRLRRQLEGDSASLEASAADLAAARLSLQAELVQNYLQLRVLDEQKRLL DATVKAYQRSLKLTENQYKAGIVPKSDVTQARTQLKSTEAQAIDLEYQRAQLEHAIAVLIGVPPAEFRLAEVERVPELPEVPVSVPSALLERRPDIAAAE RRVMAANASIGVEKAAYFPDLTLSASGGYRSGALDNWISTPNRFWSIGPAFAMTLFDGGIIRSRVEQAEANYDQTVASYRQTVLEGFREVEDYLIQLKVY EREAEVQQEALEAARESLRLIENQYKAGHVDYNSVVSVQTSALANERSLLSLRGNRLLASVQLIAALGGGWDASQLQEEPQMQVSEKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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