Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_1.2_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGGCGGGATCGAAGTCCGCGGCGCGGCTGACCGCGGTAGAGATGGCGTCCAAAGCCGGGGAGAGCAGGGCGAAGATCTCCTGGGCGCGCGCCGAGGGT TCCATGCTCCGCCCGGTGCGCACGAACAGCGGGTCGTCGAACAGCGTGCGCAGGCGGGCCAGGGCCGCGCTGATCGCCGGCTGGCCGAGGAACAGCTTTT CCGCCGCGCGGGTGACGCTGCGCTCGTGCATCAGCGTCTCGAAGACGATCAGCAGGTTCAGGTCGACGCGGCGCAGATCGTTGCGGTTCATGGACGTTCC CGTGCTGTGAGGGAATTAAACTGACCGTGCCGGCGGCGGGCGTCAAGTCGCCGGACGGCCGAGCGTTTCGCGGCGCTCGCGGAGGCCGGCATTCCTGCAG CATCATCCCCATTCATGTGTACTATCGATGTCAACGGGTGGTCCTATCCGGAAAGCCCGGATACAGTCCGTGGCATTAGAGATTGCCGGCGAGGTTCGCG
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DNA Sequence for Gene |
>M905_RS0102160
ATGTCCCGCATGATCCGCTTTCACCAGTTCGGCCCTGCCGAGGTCCTCAAGGTCGAGCAGGTCGAACTGCCGTCGCCCGCTCCGGGAGAGGTGCTGGTCC GCAGCGAGGCGATTGGCGTGAGCTGGTTCGACGTGCTCTGGCGACAGAACCTCTCCAACAGCCGGGCGCGCCTGCCCGCCGGCCTGGGCTTCGAGGTGGC CGGTGAGGTCGTGGCCGTCGGCAGCGGGGTCGAGGACCTCGTGGCCGGCGACAAGGTGGCCAGCTTCCTCGGCCACAGCATCAACGACTACCCGGCCTGC GGCGACCAGGTGCTGCTGCCGCGCAGCTCGCTGGTCCGCTATCCCGAACGGCTCGATCCCCGGCAGGCCGCGGTGCACTACACCGCCTTCCTCACCGCCT GGTTCGCCTACGTCGAGCTGGCCCGGGCCCAGACAGGCGAAACCGTGCTGCTCACCGAGGGCGCGCACGGCAGCGGTCCGGCCATGCTCCAGCTGGGCAA GGCCCTGGGCCTCAGGGTGATCGCCGCCACTCGCTGGGCGGAGGAGCGCGAGATCCTGCTCGCCCTGGGCGCCGACAAGGTGGTCCTCAGCGAGGAGGAG GACCTGGTCGGCCGGGTCGCCGCGCTCACCGACGGGCGCGGCGTGGACATCGTCATGGACGGTCTCGGGGGGCCGCAGATGTGTCTGCTCGGCGACGTCG TCGCACCGCGCGGCAGGCTGATCCTCTACGGCCTGCAGGGCGGCAACAACACGCCGTTCCCGGCCTGCGCGGCGTTCCAGAAGAACATCCAGTTCTTCGT CCACTGTCTGGGCAACTTCACCGGCAAGCCGGAGCTGGGCATCCCCCAGGACCGCCAGGCCCTCGAGCGCGCGCTGCAGGCGATCGACCAACTGACCTGC GACGGCCTGCTGAGCAGTCGGGTGGGCAAGGTGTTCCCGCTGGACAAGGTGGTCGCCGCGCACCGCTACCTGGAAGGCTGTCCGAAGGAGGGCCGGGTGG TGCTGGAGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCACTTCTGCCCGGCTTTCCTGCTAGACTACGCGCCCCTGTGCCGGGCGCGTCGTCGCGCTGCGGCCGCATCACCGCTTAGATCCGCCGATGTCCCAAGC TCCTGCCCAACGCCCAGCCTTCTCCCGCCGCTTCAGCGTGGCGCCGATGATGGACTGGACCGACCGCCACTGCCGCTTCTTCCTGCGCCTCTTGTCCAGG GAGGCACTGCTCTATACCGAGATGGTCACCACCGGCGCCATCCTGCACGGCGACGCGGCGCGCTTCCTGCGTTACGACGCCGCCGAGCACCCGCTGGCCC TGCAGCTCGGCGGCAGCAACCCGCAGGAGCTGGCGGCCTGCGCGCGGCTGGCGGAGCAGGCCGGCTACGACGAGGTGAACCTCAACGTCGGCTGCCCCAG CGACCGGGTGCAGAACAACATGATTGGCGCCTGCCTGATGGGCCATCCGGCGCTGGTGGCCGAATGCGTGAAGGCCATGCAGGACGCGGTGAGCATTCCG
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Amino Acid Sequence |
>alcohol dehydrogenase
MSRMIRFHQFGPAEVLKVEQVELPSPAPGEVLVRSEAIGVSWFDVLWRQNLSNSRARLPAGLGFEVAGEVVAVGSGVEDLVAGDKVASFLGHSINDYPAC GDQVLLPRSSLVRYPERLDPRQAAVHYTAFLTAWFAYVELARAQTGETVLLTEGAHGSGPAMLQLGKALGLRVIAATRWAEEREILLALGADKVVLSEEE DLVGRVAALTDGRGVDIVMDGLGGPQMCLLGDVVAPRGRLILYGLQGGNNTPFPACAAFQKNIQFFVHCLGNFTGKPELGIPQDRQALERALQAIDQLTC DGLLSSRVGKVFPLDKVVAAHRYLEGCPKEGRVVLEP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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