Pseudomonas sp. URIL14HWK12:I6, H043_RS0128015
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I6 H043DRAFT_scaffold00007.7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCCGCTTCAAGCTGGCTCATGTAAGTGCTGATCGCCGAGGTCGACAGGTTGAGTTCCTGCTGCGCATTGGCAAAGCCCTGATGCCGAACCACGCTGAC GAAGATGCGCAATAGTTTCAGGTCGGGTAAAGCGTTGGCCATGCGGCTCTCCAAACATCTGTCGAACGCTGATGACTTTGTGGTGAGGGGATTTATCCCC GATGGGTGGCGAAGCCGCCCCAAGCCTGTAAACCGATCCATCCGGGAAGTCGCGAGCAACGAATTTACGACTGCTGCGCAGCCGATCGGGGATAAATCCC CTCGCCACAGGGGTATCGGTACGGGTTCGGGAAGTCTATCCCGGGCCTCACCATTAGTTTAGAAAAATCTGAACTAAGTTTTTGCCCGTAGCGATTCTTC CCCCGCACTACATTTCGCAGAATCGGCCCCACAGCGGCGTCCGAACCTGTGCTTAACGGTGCGCCGACATAAATAAAACAAAGACGATGAGGCCCTACCC
|
|
| DNA Sequence for Gene |
>H043_RS0128015
GTGGACAAGATTCTTCACCAACCACTGGGCGGCAACGAAATGCCGCGCTTCGGCGGCATCGCCACCATGCTCCGACTCCCCCATGTACCGACCGCTGCCG GCCTGGACGCTGCCTTCGTTGGCGTGCCACTGGACATCGGTACTTCGCTGCGCCCCGGCACCCGCTTCGGGCCGCGCGACATCCGCACCGAATCGGTGAT GATCCGCCCGTACAACATGGCCACCGGCGCCGCGCCGTTCGACTCGCTGTCGGTCGCCGACATCGGTGACGTGGCGATCAACACCTTCAACCTGCTCGAC GCCGTGCGCATCATCGAAGAAGCCTACGACAACATCCTCGAGCACAACGTGATCCCGATGACCCTGGGTGGCGACCACACCATCACCCTGCCGATCCTGC GTGCCATCCATAAAAAGCACGGCAAGGTCGGACTGGTGCACATCGATGCCCACGCTGACGTCAACGATCACATGTTCGGCGAGAAGATCGCCCACGGCAC GACCTTCCGTCGCGCCGTCGAAGAAGGTCTGCTGGACTGCGACCGCGTGGTGCAAATTGGTCTGCGCGCGCAGGGCTACACCGCTGACGACTTCAACTGG AGCCGCGATCAGGGTTTCCGCGTGGTGCAGGCCGAAGAGTGCTGGCACAAATCGCTGGCGCCGCTGATGGCCGAAGTGCGCGAGAAAGTCGGCGGCGGCC CGGTGTACCTGAGCTTCGACATCGACGGCATCGACCCGGCCTGGGCGCCCGGCACCGGCACCCCGGAAATCGGGGGTCTGACGACCATTCAGGCGATTGA AATCGTTCGCGGCTGTCAGGGCCTCGACCTGATCGGCTGCGATCTGGTAGAAGTCTCGCCCGCCTACGACACTACCGGCAACACCTCGCTGCTGGCCGCC AACCTGCTGTACGAAATGCTCTGCGTACTGCCTGGCGTGGTTCACCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGTTCGGCCATGAACGAACGTGATCAGGTGTTGAAAGCGGCTGCCGATCTGGTATCCGCCTTCGCTCGTAACGATCGCGAGGCTTATTTCGGCGCGTTC AGCGCCGACGCAAGCTTCGTGTTTTACACCCTCGAACAGCCGCTGCTGTCGCGCGATGCCTATCAGGCCTTGTGGGACAGCTGGCGCGCCGAGGATGGCT TTGAAGTGCTGTCGTGCACTTCAAGCAACGCCTTCGTCAGCCTGCAAGGTGACGTGGCGGTGTTTATCCATGACGTGGCCACCGAGCTGCGCATGCAAGG GGAGCAACATTTCAGCCAGGAGCGCGAGACGATTGTTTTCAAGAAACAAGCGTCGAGCCTAGAACAACAAGGCCATTGGCTGGCCTGCCACGAACATTTG TCCGCAATGCCGGAAGGGCTGCCATCCCCTTAGCCAAACAGGTGACGCCTCACACACGATGAGGCGCGCCTTTATGATCGGAGCAGATCATGAATAACAA
|
|
| Amino Acid Sequence |
>agmatinase
MDKILHQPLGGNEMPRFGGIATMLRLPHVPTAAGLDAAFVGVPLDIGTSLRPGTRFGPRDIRTESVMIRPYNMATGAAPFDSLSVADIGDVAINTFNLLD AVRIIEEAYDNILEHNVIPMTLGGDHTITLPILRAIHKKHGKVGLVHIDAHADVNDHMFGEKIAHGTTFRRAVEEGLLDCDRVVQIGLRAQGYTADDFNW SRDQGFRVVQAEECWHKSLAPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAIEIVRGCQGLDLIGCDLVEVSPAYDTTGNTSLLAA NLLYEMLCVLPGVVHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|