Pseudomonas sp. URIL14HWK12:I6, H043_RS0120340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I6 H043DRAFT_scaffold00016.16_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTCGTTGATCACTTGGCGATCGATGTACAACAGCACATGGCCCTGATCGTCGAGGCGGCACACGGTGTGCGAATCGATGTGTTTGTCGTAGAGGGTTCT GGGGCTCATCACGGGGCTCACTAGGGGAATCGAGTGATTTCCATCATAGGGAGCGCCTTGACCGCATCAATTGCCAGGCAGTGAGAGCGGCATTCATGAA TCGTGTTTGATCGGCTGATCACCGAACGCCCCTGTGGGAGCGGGCTTGCTCGCGAAGGCGTCGTGTCAGTCGACCTCAATGTTGAATGATCTACCGCTTT CGCGAGCAAGCCCGCTCCCACAGGGGGGGAATTGCGAAACATTTGCTTTCATATCACTTTTCGGGATTTGTCCGGCTCATCCGTCCTATAGAGATGCAGG CCGTTCGCACAGGCAACAGCCACGACCGCGCCTTTTGCGGACACCCGCGCTGCGAAGCCCGTAGCCGCGTGCCCTTTCATCGAAATCAAGACGCGCAATC
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| DNA Sequence for Gene |
>H043_RS0120340
ATGTCGAAGAAATCCCGTTCCAAACTGTGGTTCCTGGTGCATAGCTGGCTCGCGCTGCCGATCTGGTTTTTTGTCCTGATCGTGTGTGTCACCGGCACGC TGGCGGTGGTCAGCCAGGAAATCGTCTGGCTGGCCAACCCGCAGATGCGCGCCAGTCAGCCGTCGGACGACGCGCCGCGGCTCAGTTACGATCAGGTGCT GGCCGCGATCAAACAGGCCGAACCGCAGACGCTGGTGGAAAGCATCAGCCGCCCCGACGAATCGCACTTCGCCCTCGACGTCGAAGTCAGCTACCCCGAC GGCCGCTCGCAGACGGTCTACGTCAACCCATACACCGGGGTGATCCAGGGCCCGGCGCCGGACTTCAACTTCAAGGCGTTCACCCGCGCCCTGCACGGCT GGTGGCTGGTGCCGTTCACCAACGGTTTCAGCTGGGGCTGGTACCTGGTGTCGTTCCTCGGTCTGCCAATGCTCGCTTCGCTGGTGACCGGGCTGGTGGT GTACAAGCGCTTCTGGAAAGGTTTCTTCAAACCCACCCTGCGTTTTCGTCACGGTGCGCGGATCTTCTGGGGCGACTTCCATCGACTGAGCGGCATCTGG TCGATCTGGTTCATCGCGGTGATCTCGATCACCGGCACCTGGTTTTTGATCCAGGCCATTCTGGCCGACAACCAGGTGTCCATCAGCAGCGAACCGATCA TTCCCGCCATGTCTCGGGAAAGCGTACCGATGTCGAGCGACGCCAGTCCTCCCCCACGGATCAGCCTCGATCGCGCGGTACAGATCGCCGAACAGCACAT CCCCGGGCTGGAAGTCAGCTTCGTCAGCCTGCCGGGCAATGCCTACAGCCACCTGAGCCTTGGCGGTCGCGGCTGGTATCCGCTGATGTTCCAGACCGCC ACGCTCAACCCGTACAACGGTGAGATGGCCGCCACGCGACTGCTGACCGACCGTTCCTCGCTGGAGTTCGTCACCGAGTCGATGCGCCCGCTGCACACCG GTGATTTCGGCGGTCTGTGGATCAAACTGATCTGGTTCTTCTTCGGCCTGCTGCTGAGCATGATGGTCCTCAGCGGCCTGTTGATCTGGACCAAGCGCAC CGCGCTGGCCACCGCCAACGCCCTCAAGCGCGAAAATAAAAAGGCCCGCAGCCCCCGCGTCAGCCGTGAACCGGCGGAGGTCAGCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGTCCAATCGCACTGCCCAACCGTCCGCCCTGCGCCGCTTCTGGCACAAATGGCGTTTTCATCTGAACGCCCTGTTGCTGCTGATTCCGTTGGGCTT CATGCCCAAGTATTTCGCCGATGCCGCGCTGTTTCGCGGTGACGTCGGCCTCGGTGAGCATGAGGTCGGCGAAATCCAGGTCGGCCCGTGGAGCCTGCGC CTGGCCGAACTGCGTAACGAAGCACCGCGCCTGAGCGGCCCCGCAGGTTACATGAAGGACTTCAATGCCGCCCTCTGCGATGCCTGTGTCGAACAGGTCA AGGCCACCTACCTGCGCATCGGCAAACCGCGCAGCCTGCGCGCCGCCGGGGTGATTTTCTTTGGCACGCCGTATCGCATGGGCGCGCAATTGCCGGTGGC GGAAAAAACCAAAGCCGATGCCGAACTGTGGATCACCATGGAAGGCTGGGACGGCAGCATGCATCAGGCCTCGATTCCCCTGAGCCAGGCCTCCCCCGCC
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| Amino Acid Sequence |
>peptidase
MSKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLANPQMRASQPSDDAPRLSYDQVLAAIKQAEPQTLVESISRPDESHFALDVEVSYPD GRSQTVYVNPYTGVIQGPAPDFNFKAFTRALHGWWLVPFTNGFSWGWYLVSFLGLPMLASLVTGLVVYKRFWKGFFKPTLRFRHGARIFWGDFHRLSGIW SIWFIAVISITGTWFLIQAILADNQVSISSEPIIPAMSRESVPMSSDASPPPRISLDRAVQIAEQHIPGLEVSFVSLPGNAYSHLSLGGRGWYPLMFQTA TLNPYNGEMAATRLLTDRSSLEFVTESMRPLHTGDFGGLWIKLIWFFFGLLLSMMVLSGLLIWTKRTALATANALKRENKKARSPRVSREPAEVSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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