Pseudomonas sp. URIL14HWK12:I6, H043_RS0108185
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I6 H043DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAATTTCCGCCAAAGTCATCAGGCTGCCCAGCACGTAATCGACCACGCCCCGCGCATTGCAACCAGGCGCGCTGGACCAGCTGATGCCGGCCTCGTTGA AATAATCGAGATCGAGGTGATCGGTACCAATGGTGCAGGTGCCGACGAAACGCACTTTGCTGCCTTCGAGCAACGCGCGGTTGACGTTGGTCACCGAGCG CACCAGCAACACATCGGCCTGCTCGACCGTTGCACGATCGATGGAACGGCCCGGCACCCGGCGGATCTCGCCGAAACCGGCAAAAAAGGCATCGAGCAGC GGAATATTTTCGTCGGCAACAATCAGCATGGCGGGCTCCTTGAGGGGATCGGCAGTTTAGGTGCAGATCCACCGTTGGGCCAGCGCCACAGTGGATGGCA TCGATGATTACAAATCCGCAACAGAGGATTTTTCCTGACTGTCACGTCAGCGGCGTAGAATGCGGCGCCTTGCGCATCAACACCTGTGGACGCTTTGCCT
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| DNA Sequence for Gene |
>H043_RS0108185
GTGAATTCTGTTACTGATCAACCTCTCGCTGCCTCACTCACCCGCCCCGCGCGAATTCGCCTGGAGTTCAGGAACCTGCTCGCCCTGGCCTTGCCGATCA TCATCGCGCAACTGGCGACTACCGCGATGGGCTTCGTCGATGCGGTGATGGCCGGCCGCGTCGGGCCGAAAGATCTGGCGGCGGTAGCGCTGGGCAACTC GATCTGGGTCCCGGTGTTTCTGCTGATGACCGGCACCCTGCTGGCCACCACGCCGAAAGTCGCCCAGCGTTTTGGCGCTGGCACCCACAGTGAAATCGGC CCGATCGTGCGTCAGGCGCTGTGGCTGGCGCTGGTGGTGGGCCTGATCGCGACAGCGATGCTGGTCGCCGCCGAACCGGTGCTGCATCTGATGAAGGTCG ATCCCGAGCTGATCGGCCCGTGCATGCAATACCTGCACGGCATTGCCAGCGGTCTGCCGGCGGTGGCGTTCTATCATGTGCTGCGCTGCACCAGTGACGG CATCGGCCGTACCCGCCCGGCGATGGTGCTGGGGCTGTGCGGTCTGGCGCTGAACATTCCGCTGAACTACATCTTCATCTATGGTCACTTCGGCGTGCCG GCCATGGGCGGCGTGGGTTGCGGCTGGGCCACGGCCATCGTGATGTGGGTCATGGCGCTGGGGCTGGCCGGTTACGAGCGCTGGGCGCCGGCCTATCGTT CGAGCGAGATCTTCAGCCGTTTCGACTGGCCACAATGGGCGGTGATCAAGCGTCTGCTGGCGATCGGTCTGCCGATTGGCATCGCGGTGTTTGCCGAGTC GAGCATCTTCGCGGTGATCGCCCTGCTGATCGGCAGCCTCGGCGCCACCGTGGTGGCCGGGCATCAGATCGCGCTGAACGTCAGCTCGCTGGTGTTCATG ATTCCGTATTCGCTGGGCATGGCGGTGACCGTACGCGTCGGCCAGGCCTTGGGCCGTGAAGAGCCGCGTGAAGCACGCTTTGCCGCCGGTGTCGGCATGG GCACTGCACTGGCTTACGCCTGTATTTCGGCGAGCATGATGCTGTTGCTGCGCGAGCCGATTGCGTCGATCTATACGGCTGATCCGACGGTGATCCACAT CGCGGCGATGCTGATTGTGTACTCGGCGCTGTTTCAGTTTTCCGATGCGATCCAAGTGACGGCTGCCGGCGCTCTGCGCGGTTATCAGGACACCCGGGTG ACGATGATCCTGACCCTGTTCGCCTACTGGGGCATCGGCCTGCCGGTGGGTTACGCCCTCGGCCTGACCGACTGGCTCGGCGAACCGCGTGGCCCGAGCG GCTTGTGGCAGGGTTTGATCGTCGGTTTGAGCTGCGCGGCACTCATGCTGTCGATCCGCCTGACCCGCAGCGCGCGCAAACGTATTCGGATCAGTCGCAG CGCCGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCCTTACGCAGGATAAAAAAAATGTGGGAGCGGGCTTGCTCGCGAAAGTGGTGTTTCAGTCGACATTTACAGTGACTGACACACCGCTTTCGCGAGCA AGCCCGCTCCCACATTGGATTTTGCGTTTGCCTGAGGGTCAGGCTTGTTTCTTGCGGATCCAGTACAGATAAGTACCAGCCTCTTCGTGCTGGCCCACCA GTTCGTGGTCGAGAAACACGCAGAACTTGGGAATGTCGCGACGGGTCGAGGGATCGGTGGCAATCACCTTGAGCAGGCCGCCAGGTACCAGGTCTCGGAT GTGCTGGTGCAGCATCATCACCGGTTCCGGGCAATTGAGACCGGTGGCGTCGAGGGTGCCGTCGACCGGCGTGTCGATCATTTCACTCATGATTCACTCC TGAAACTGGCCGGCATTGTCGCGCATTGCCGGGTGCTCAGTCATCTGTAGCGAGGGGATTTATCCCCGATGGCTTGCGGGGCGGCCGCAAAGACTGGGGA
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| Amino Acid Sequence |
>multidrug transporter
MNSVTDQPLAASLTRPARIRLEFRNLLALALPIIIAQLATTAMGFVDAVMAGRVGPKDLAAVALGNSIWVPVFLLMTGTLLATTPKVAQRFGAGTHSEIG PIVRQALWLALVVGLIATAMLVAAEPVLHLMKVDPELIGPCMQYLHGIASGLPAVAFYHVLRCTSDGIGRTRPAMVLGLCGLALNIPLNYIFIYGHFGVP AMGGVGCGWATAIVMWVMALGLAGYERWAPAYRSSEIFSRFDWPQWAVIKRLLAIGLPIGIAVFAESSIFAVIALLIGSLGATVVAGHQIALNVSSLVFM IPYSLGMAVTVRVGQALGREEPREARFAAGVGMGTALAYACISASMMLLLREPIASIYTADPTVIHIAAMLIVYSALFQFSDAIQVTAAGALRGYQDTRV TMILTLFAYWGIGLPVGYALGLTDWLGEPRGPSGLWQGLIVGLSCAALMLSIRLTRSARKRIRISRSAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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