Pseudomonas sp. URIL14HWK12:I6, H043_RS0106675
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I6 H043DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCGAGGCTGCCGGTGACTTCTTTCCGGTAACGGGCGATGAAGGGAACGGTAGAGCCTTCATCGAGTAGCGCGACGGCCGCTTCGACCTGTTGCGGGCG TACGCCGAGTTCCTCGGCGATGCGGCTGTTGATGCTGTCCATAAAACCACCTGACATATTGTGAAAGCAGGCTCGCAGGCACGGAAATAAAGGCCCGGAG TCTGGTTGAGCGGCTAGAAAATTGCCGCTGCCTGGGTCAAAAGGCACCCCATTGACCCGTGAAATCGAATAATTACTGCGCAGGCCCGGAAAATATCGCG GCCACCTGCGGTAACGATTCAGACGTTGCCTGGCACAAAACGCCGCGCATTATAACCAGCGTTCTGTCATTCGGGGGTGTAGCAGTCTGTAGGTAGAAAC CCCGGTTTTCTGGCAGTGAAGGAAAAATCTGCTAACAATGCACACGGTGCGTATAACGGCAGCTACGCCATAATGCGCGCCGAGCTAAAAGGAGCATCCA
|
|
| DNA Sequence for Gene |
>H043_RS0106675
ATGAGCAGCACTGCAAACAATGCTGAAGGCGAAAAAATTCTAATTGTTGACGACGATCCGGGGCTGAGCAGCCTGCTGGAACGTTTCTTCGTCAGCAAGG GCTACCGTGCCCGTGCCGTACCGAACACCGAGCAAATGGACCGTCTGCTGTCGCGTGAAGTGTTCAATCTGGTCGTCCTCGACCTGATGCTGCCGGGCGA AGACGGCCTGACCGCCTGCCGTCGCCTGCGAGCGGCGAACAATCAGATTCCGATCATCATGCTCACCGCCAAGGGCGATGAGATGAGCCGCATCAAAGGC CTGGAGCTGGGCGCCGATGACTATCTGGCCAAGCCGTTCAACCCGGACGAGCTGATGGCGCGGGTCAAAGCCGTTCTGCGGCGTCAGGCCGCACCGGTGC CGGGCGCGCCGGGCAGCGAAGACGAAAACGTCACCTTCGGTGATTACGTGCTGTCGCTGGCGACCCGCGAGCTGAAACGTGGCGAAGAAGTGCACATGCT CACCACCGGTGAGTTTGCGGTACTCAAGGCGCTGGTAATGAACGCGCGTCAGCCGCTGACCCGCGACAAACTGATGAACCTGGCCCGTGGTCGCGAATGG GATGCGCTAGAGCGTTCCATCGACGTGCAGATTTCCCGTCTGCGCCGGATGATCGAGCCGGATCCGTCGAAACCGCGTTACATCCAGACGGTCTGGGGCG TGGGCTACGTGTTCGTACCGGATGGCGCCGCTACCAAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGGCGATTTGTAGGAGCGGGTCTGCGCAGACCGGGTTGATCGACCCTCTACGCAGACTCGCAATCCGCAATATGCGAGCATGGCTCGCTCCTGCAAGTG TGTAACGGTTATCGATGAAAACCCCCGTCTGGTTCCCCCAAAGTTTTTTCTCCCGCACCCTGTGGCTGGTGCTCATCGTCGTGCTGTTTTCCAAGGCGCT GACCCTGGTTTATCTGTTGATGAACGAGGACGTGCTGGTGGATCGCCAATACAGCCACGGCGTTGCCCTGACGTTGCGCGCCTATTGGGCGGCCGATGAA GAAAATCGCGCAAAGATTGCCGATGCCGCAACCCTGATCCGGGTAGTCGGCGCCGGTGTACCGGAGGGCGAACAACACTGGCCTTACAGTGAAATCTATC AGCGGCAGATGCAGGCAGAACTGGGCGCCGACACCGAAGTGCGCTTGCGCATGCACTCGCCGCCGGCGCTGTGGGTGCGTGCACCAAGCCTCGGTGACGG
|
|
| Amino Acid Sequence |
>chemotaxis protein CheY
MSSTANNAEGEKILIVDDDPGLSSLLERFFVSKGYRARAVPNTEQMDRLLSREVFNLVVLDLMLPGEDGLTACRRLRAANNQIPIIMLTAKGDEMSRIKG LELGADDYLAKPFNPDELMARVKAVLRRQAAPVPGAPGSEDENVTFGDYVLSLATRELKRGEEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREW DALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGAATK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|