Pseudomonas sp. URIL14HWK12:I6, H043_RS0106305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I6 H043DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGCGGCTGTCGCCAAGGAAGAAACCTTTGGCCCGCTGGCGCCGCTGTTCCGCTTCAAAGACGAAGCCGAAGTGATCGCCATGTCCAACGACACCGAGTT CGGTCTGGCGTCGTACTTCTACGCTCGTGACCTCGGTCGTGTGTTCCGTGTGGCTGAAGCGCTGGAATATGGCATGGTCGGCGTCAACACCGGGCTGATC TCCAACGAAGTCGCGCCGTTCGGCGGCATCAAGGCGTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAAGATTACCTGGAAATCAAATACCTCT GCCTTGGCATCTAAGCCTCGGTAGAAGATCGCTGTAAACGCAAAGGGCACGAGAGCGCTGTCCCTTTGCGTCGTTTCAAACCGGAATTTTCTCTGCGGCC GGGAACGCCGTGGCAGTCGATCATCGCATGCTGCCACCGCCGATTCCTCCCGCTTAATCCTTGAACCACGCCGCCCGATGAGCGGTGAATGAGGACTGTA
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| DNA Sequence for Gene |
>H043_RS0106305
ATGAGCAAGACTAACGCTGAACTGATGGCCCGTCGTACCGCAGCTGTTCCACGTGGTGTTGGCCAGATTCACCCGATCTTCGCTGAATCGGCGAAGAACG CTACCGTGACTGACGTTGAAGGTCGTGAATTCATCGACTTCGCCGGCGGTATCGCTGTGCTGAACACCGGCCACGTGCACCCGAAAATCATCGCCGCCGT GACCGAACAGCTGAACAAGCTGACCCACACTTGCTTCCAGGTACTGGCCTACGAGCCGTACGTTGAGCTGTGCGAAAAGATCAACGCCAAGGTGCCAGGT GATTTCGCCAAGAAAACCCTGCTGGTGACCACCGGTTCCGAAGCCGTGGAAAACGCCGTGAAAATCGCCCGTGCCGCCACTGGCCGTGCCGGCGTGATCG CCTTCACCGGCGCTTACCACGGTCGCACCATGATGACCCTGGGCCTGACCGGTAAAGTCGTGCCTTACTCGGCCGGCATGGGCCTGATGCCAGGCGGCAT CTTCCGCGCGCTGTACCCGAACGAACTGCACGGTGTGAGCATCGACGATTCGATCGCGTCCATCGAACGCATCTTCAAGAACGACGCCGAGCCGAAAGAC ATCGCCGCGATCATCATCGAGCCTGTGCAGGGTGAAGGTGGTTTCTACGTCGCGCCGAAAGAATTCATGAAGCGTCTGCGTGCCCTGTGCGACCAGCACG GCATCCTGCTGATCGCTGACGAAGTGCAGACTGGCGCTGGCCGTACCGGCACCTTCTTCGCCATGGAACAGATGGGCGTTGCCGCCGACCTGACCACCTT CGCCAAATCCATCGCTGGCGGCTTCCCGCTGGCGGGTGTCTGCGGCAAGGCCGAATACATGGACGCCATCGCTCCGGGCGGCCTGGGCGGCACCTACGCC GGTAGCCCGATCGCTTGCGCTGCGGCGCTGGCCGTGATGGAAGTGTTCGAAGAAGAGCAACTGCTGGACCGCTGCAAGGCTGTTGGCGAGCGTCTGGTAA CCGGTCTGAAGGCCATCCAGGCCAAGTACCCGGTGATCGGTGAAGTGCGTGCGCTGGGCGCGATGATCGCGGTCGAGCTGTTCGAAAACGGCGACAGCCA CAAACCAAACCCGACCGCCGTTGCGGCTGTGGTGGCCAAGGCGCGCGACAAGGGCCTGATCCTGCTGTCCTGCGGCACCTACGGCAACGTGCTGCGCGTT CTCGTACCGCTGACCTCGCCGGACGAGCAACTGGACAAAGGTCTGGCGATCATCGAAGAGTGCTTCTCGGAGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCGGGCACTGTGTGATCTGATCGAGAAAAACCCGCTTCGGCGGGTTTTTTTATGCCTCGGAAACCCTTTTGCGCTGTATCGATAGGCCAGCATTGGCT AAGGTTCAGGCATTGCAAGGGAGAGCGCGCATGACCGCCGTTGATTTACCCGCCGTACCCCGAGTGCTGATTGCCGAGGCCGATCCGTGGTCTCGTGACC TGCTTAAACAAGTGTTGCTCAACGTGCGCTGTGATGCGCGGCTGGACTTGTGTGCCGATGGCCAGCAAGCCATGTCGTTACTCAGCGAAGTGCCTTATGA CCTGGCTATCGTCGATTGGGAGTTGCCGGGCATCGATGGTTTGAGCGTGCTGCGCAGCGTGCGCCAGCGCAAACGCAATCCGCCGCTGCCGTTCATTCTG ATGAGCAGTCGCGCTGACAGTGCCAGCGTACGCGAAGCTCTGCCACTGGCGCCGACGGCGTATCTGACCAAGCCCCTGAACATGGAAACCCTGACCGAGC
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| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNAELMARRTAAVPRGVGQIHPIFAESAKNATVTDVEGREFIDFAGGIAVLNTGHVHPKIIAAVTEQLNKLTHTCFQVLAYEPYVELCEKINAKVPG DFAKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALYPNELHGVSIDDSIASIERIFKNDAEPKD IAAIIIEPVQGEGGFYVAPKEFMKRLRALCDQHGILLIADEVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA GSPIACAAALAVMEVFEEEQLLDRCKAVGERLVTGLKAIQAKYPVIGEVRALGAMIAVELFENGDSHKPNPTAVAAVVAKARDKGLILLSCGTYGNVLRV LVPLTSPDEQLDKGLAIIEECFSEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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