Pseudomonas sp. URIL14HWK12:I6, H043_RS0103185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URIL14HWK12:I6 H043DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATTGAAGGAACACCTGGGTTACAGGCTGCAGAATGTGTTTCTGGATGTCGCGCACATGGCGCCATTGTTGTGCCCACAGGCGAACATTCGCGAGGCCGG CCTGGATGAATGGATCGACTGGTTCAAGCTTGAGGTGTTCGAGCGGCACAACGCGAGTGCCGATGCGCTGGCCACGGCGGAACTGGCGTTGATCCTGTTC AGCCGGGCGCGGCAGCAGCAGATTCATAGTCCGTTGAACCTGCAACAGCGCTTGAGTCAGTGGAAACGCCGTCAGCAGGCGCCTTCCTTCTAGATCTTCG GTGCCGGTACTGGCCTCTTCGCGAGCAAGCCCGCTCCCACACTGGCATGCATTCCCCCTGTGGGAGCGGGCTTGCTCGCGAAGAACGATGATCCGGTCTT ACTGATACCACCCGACCAGTGGCCAATTGCTAACCATTCCCACCTCTGCGAGAATCGCGAACAATTCTCGTTGGTTAACACTTCCCAATCGGTGCGTCTG
DNA Sequence for Gene
>H043_RS0103185
GTGTCGTCAGTCCCAAGCCCTCACAGTGAACTCGTCGGTGCGTTGTATCGCGACCATCGCGGTTGGCTGCTGAGCTGGTTGCGGCGCAACGTGGCGTGCC CGCAGCGGGCCGAAGACCTGAGCCAGGACACCTTCGTACGGCTGCTCGGTCGCGATGAATTGCTGACGCCGCGCGAACCGCGGGCGTTTCTGGTGGCGAT CGCCAAGGGCCTGCTGTTCGACTACTTCCGCCGCGCCGCGCTGGAACAGGCATACCTCACTGAATTGATGCTGATCCCCGAAGGCGAACAACCTTCGGTG GAAGAACAGCAACTGATCCTCGAAGACCTCAAGGCCATCGACCGCCTGCTCGGCAAACTGTCGACCAAGGCCAGCGCCGCTTTCCTGTATAACCGCCTCG ACGGCCTCGGCCACGCCGAAATCGCCGAGAAGCTTGGCGTCTCGGTGCCGCGTGTGCGGCAGTACCTCGCGCAAGGCATTCGCCAGTGCTACATCGCCCT GTACGGTGAGCCGACATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCGGCCAGTTCCAAACCGGTCTCGGCTCAGGTGCTGGACGCGGCGATTGCCTGGCAGTTGTCGCTGGATTCCGGCAGTCCGCTGGAGCGCGAAGAGTT CGCCAAGTGGCACGCGGCCCATGAAGAACACGCCCGCGCCTGGCGCCAGCTGGGCATGCTCGATCAGCGCTTCAGCGTCGCCAACGGCCCGGCCCGCGCG GCCTTGCTGCAATCGCGCGAAGGCATTCGACGCCGTGTGCGCAAGCTCGGCAGCGGATTGGCCAGCGTGGTGGCGCTCGTCGGTCTGGCGTTGTTTGCCG GTGATCGCTACTTGCCGCTGGATTACTGGCTCGCCGATCAACGCACCGCCACCGGCGAGCAGCGTACGGTGCGCCTGGCCGATGGCACCGTGCTCAACCT CAACACCCACAGCGCGGTGGATGTGCGTTTCGATGCCAGGCAGCGGCTGATCGTGTTGCAGGCAGGCGAGATCATGGTCGAGACCGGCCATGGCGATGCG
Amino Acid Sequence
>RNA polymerase sigma factor
MSSVPSPHSELVGALYRDHRGWLLSWLRRNVACPQRAEDLSQDTFVRLLGRDELLTPREPRAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEGEQPSV EEQQLILEDLKAIDRLLGKLSTKASAAFLYNRLDGLGHAEIAEKLGVSVPRVRQYLAQGIRQCYIALYGEPT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site