Pseudomonas sp. URMO17WK12:I4, H042_RS0122385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URMO17WK12:I4 H042DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCATGCTTGCGGGCCAGCTCCGGCAACTTTTCCAGGCCGGTGACCGAATAGGTACGAATGCACTGGAAACGCTGGGCCAGCAGCGCCAGGTCGGTGTCCA TCTGCTCGGGGTGGATCTGCAGGGGCAGATCGAATGGCGACTGATCCTTGCCGAACGGCGTGTAGGACGCGCATTGCAGCTTGTGGGTCGGCGTGGCGGC ATCGGCCAGCACCACCGGCTTGCCGATGGTTTGCCAGAGGCTGCCCAGCGCGAGAAAACCGACGATGCAGGCACAGAGGTACGGGAGCAGGGGAAAGCGG GCGTTGGCGGGCATGGTCGAACACGCATGGTAAATGGAGACGCGCATCTTAGCGGCGAGAGGGGGCTTTAGATAGACGCGGAAAGAGTGGTTACAAAGCC ATTCGTTGACACTCGATTCGGGCGGACTAGTTTTGATCATGCGGCGTATGGAGTACCCGCGTCGCTCAACTCGAGTCGAACCCGAAAAGGACGTCTAATC
DNA Sequence for Gene
>H042_RS0122385
ATGCTGAAAACTACCCTGCAAGCCTTGCTGTTTTCCCTGGCCGCCAGCGCCACGTTGCTGGCCGGCGCCAACGAGTCGACCAAGGAGCCGGCTACCGAAC CGGTTGCCCAACAGGTGGCAGAACTCAATCCCGTCAACCTCAATACCGCCGATGCTGAAACCCTGCAGCGCGAACTCAGCGGTGTGGGCGCGGTAAAGGC GCAGGCCATCGTTGCCTATCGCGATACCCACGGCGAATTCGCTTCGGTGGACGAGCTGCTCGAAGTCAAAGGCATCGGTGAGGCTTTGCTCGAGCGCAAT CGCGCCAAGCTGACCGTCGGCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTTTCCATCCTTGCCGCGCTTCTCCTCGAGGGCGCGGCTTTTTTATGGGCGATGATTTTTCTGTCGCCAGTGCTATCAAGGCTGGCTTGTTTTCTGCTT CAACCCCTTGGCTGACAACGGATTTATGGCGCTGGCGGCAGTTGGCACCCTTGTTGCAAATACCCTCAGCAAAGCACTCGCGGCGTCAAAAAACCGCGGT CAGGTGGAGGAAAGGTCATGAGTCAGGGTGTCGCGTTCAATCGTCTAATGCTGGAAATGCGCTCGATGCAGGCCGAGGCCATGGCGCGCAAGCCGGCTGC GCCCCAGGCTCAGGAAGTTGGCGCGCCGAGCTTCTCTGACATGCTCGGTCAGGCGGTGAACAAGGTCAGCGAAACCCAGCAGGCCGCCGGCCAGCTGGCC ACGGCCTTCGAGATGGGCCAGAGCGGCGTCGACCTGACCGACGTGATGATCGCCTCGCAAAAATCCAGTGTCTCGTTCCAGGCCATGACCCAAGTGCGTA
Amino Acid Sequence
>competence protein ComEA
MLKTTLQALLFSLAASATLLAGANESTKEPATEPVAQQVAELNPVNLNTADAETLQRELSGVGAVKAQAIVAYRDTHGEFASVDELLEVKGIGEALLERN RAKLTVGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site