Pseudomonas sp. URMO17WK12:I4, H042_RS0121190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006364 rRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00003
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.300.20 - IPR015946 K homology domain-like, alpha/beta 4 124 4.4E-36
Hamap MF_00003 Ribosome-binding factor A [rbfA]. IPR000238 Ribosome-binding factor A 6 116 26.538572
PANTHER PTHR33515 RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED IPR000238 Ribosome-binding factor A 3 133 3.7E-29
Pfam PF02033 Ribosome-binding factor A IPR000238 Ribosome-binding factor A 7 116 3.0E-32
SUPERFAMILY SSF89919 Ribosome-binding factor A, RbfA IPR023799 Ribosome-binding factor A domain superfamily 2 109 3.66E-32
NCBIfam TIGR00082 JCVI: 30S ribosome-binding factor RbfA IPR000238 Ribosome-binding factor A 1 118 5.3E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.