Pseudomonas sp. URMO17WK12:I4, H042_RS0101935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07153
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07153
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR33202 ZINC UPTAKE REGULATION PROTEIN IPR002481 Ferric-uptake regulator 24 165 8.9E-25
FunFam G3DSA:3.30.1490.190:FF:000007 Fur family transcriptional regulator - - 107 165 1.2E-21
CDD cd07153 Fur_like IPR002481 Ferric-uptake regulator 44 159 6.06449E-21
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 28 160 1.92E-29
FunFam G3DSA:1.10.10.10:FF:000137 Zinc uptake transcriptional repressor - - 18 106 1.4E-37
Gene3D G3DSA:3.30.1490.190 - IPR043135 Ferric-uptake regulator, C-terminal domain 107 165 2.6E-14
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 19 106 1.5E-26
Pfam PF01475 Ferric uptake regulator family IPR002481 Ferric-uptake regulator 36 155 6.5E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.