Pseudomonas sp. URMO17WK12:I11, H041_RS0120880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I11 H041DRAFT_scaffold00014.14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGTCGAGAAAAGCAGATCGCCTTCAACGAAGCGCACGGTATCGTGCCCAAAAGCGTGGTCAAGGACATCACCGATATCCTTGAAGGTGCGACCGTCCCG GGCGCTCGCAGCAAGAAACGCAAGGGGATGGCCAAGGCGGCAGAGGAGAGCGCGCGTTACGAGGCCGAGTTGCGCACCCCAGGCGAAATCACCAAGCGCA TCAAGCAGCTCGAAGACAAGATGATGCAATACGCCCGTGACCTGGAATTCGAAGCCGCCGCCCAGTTGCGTGACGAGATCACCCAGTTGCGAGATCGCCT GATCGCAAGTTGATGCCTGGCGGTCGGCATTCACCGCGCATCGATCAGGCGAGACCGCGCTGCATCCAAGCCACCCACGGTATGGCCTACCGTGGGCTCG GCATCATGGGGGGCCAGCTCAGGTTCACCGCATCGCTGGAGCCCGGTGCCTGCCACCTGCTAACATCGAGGCTTTGTTTCATCTTTCGTTCGAGACTCCC
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| DNA Sequence for Gene |
>H041_RS0120880
ATGACCACCGTACGCACGCGTATCGCGCCATCGCCTACCGGCGACCCCCATGTCGGCACCGCCTACATCGCCCTGTTCAACTACTGCTTCGCCAAACAGC ACGGCGGCGAGTTCATCCTGCGCATCGAGGACACCGATCAGCTGCGCTCCACGCGCGAGTCCGAGCAGCAGATCTTCGATGCGTTGCGTTGGCTGGGCAT CGAATGGAACGAGGGCCCGGACGTGGGTGGCCCACATGGTCCGTATCGGCAGAGTGAGCGCGGTGAAATCTATGCCCAGTACGCCAAGCAGCTGGTCGAC GCCGGCCATGCGTTCTATTGCTTCTGCACCGCCGAGGAGCTGGAGCAGATGCGCGCCGAACAGCAGGCCCGCGGCGAGACGCCTCGTTACGATGGGCGAG CGTTGCTGCTGAGCGCCGACGAAGTGCAACGCCGGCTGGACGCAGGCGAGCCCCATGTAATCCGCATGAAAGTGCCCGCCGAGGGCGTGTGCGTGGTGCC GGACATGTTGCGCGGTGACGTGGAGATCCCGTGGGATCGCATGGACATGCAGGTGTTGATGAAAAACGATGGCCTGCCCACGTACTTCCTGGCCAACGTG GTCGACGATCACCTGATGGGCATCACCCACGTACTGCGCGGTGAAGAGTGGTTGCCGTCGGCGCCCAAGTTGATCAAGTTGTACGAGTACTTCGGTTGGG AACAACCCAAGCTGTGCTACATGCCCCTGCTGCGCAACCCGGACAAGTCCAAGCTTTCCAAACGCAAGAACCCGACGTCGGTGACGTTCTACGAGCGCAT GGGCTTCATGCCCGAAGCCATGCTCAACTACCTGGGCCGGATGGGCTGGTCCATGCCAGATGAGCGCGAGAAGTTCTCGCTGGCCGAAATGGTCGAGCAC TTCGACCTGTCCCGCGTTTCGCTGGGCGGGCCGATCTTCGACATCGAGAAGCTCTCCTGGCTCAACGGCCAATGGCTGCGTGAGCTCCCTGTGGAAGCCT TTGCCCAGCGCCTGCAGAAATGGGCGTTCAACAGCGACTACATGATGAAAATCGCGCCGCATGTGCAGGGCCGGGTTGAAACGTTCAGCCAGGTGGTGCC TTTGGGCGGGTTCTTCTTCGAAGGCGCACTGAAGCTTGACACCAAGCTGTTCGAAAGCAAGAAATTGTCGGCCGATCAGGTGCGCCAGGTCCTGCAGTTG ATCCTGTGGAAGCTTGAGAGCCTGCGTCAGTGGGAAAAAGAGCGCATCACCGGTTGCATTCAGAGCGTGGTCGATGCATTGGAACTGAAGCTGCGTGACG CCATGCCCTTGATGTTCGCCGCCATCACCGGGCAGGCAAGCTCGGTGTCGGTGCTCGATGCCATGGAAATCCTCGGCCCTGACCTGACCCGCTATCGTCT GCGTCAGGCCTTGGATTTGCTGGGCGGTGTTTCCAAGAAAGAAAACAAGGAATGGGAAAAGCAGCTGGCTACCATCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATGAGGCAGGCGGGCAGGCCGTCGTTCCCACGACGGTCGGCCGCTGCCGTGTGCAATGGATCCAGCGTTGCAGGCTGGTCTGGCCCGCCCGATAAACCG ATATTGCGGGGCAGGGCGGTAAGTGATTGTTATCTGTGAAAAAACTTTTGGTTTTTTTGAAGATTTAGTTTGACAGGCCTGCACCTGGATCTTAATATGC GCCCCGTCCACAGCGATGAACATAAACGAAACGCCAGGCACCCAGCCAGCGTATCGGTTCAGCGTGACTCTGTGGGGCTATAGCTCAGCTGGGAGAGCGC CTGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIEWNEGPDVGGPHGPYRQSERGEIYAQYAKQLVD AGHAFYCFCTAEELEQMRAEQQARGETPRYDGRALLLSADEVQRRLDAGEPHVIRMKVPAEGVCVVPDMLRGDVEIPWDRMDMQVLMKNDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLIKLYEYFGWEQPKLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLAEMVEH FDLSRVSLGGPIFDIEKLSWLNGQWLRELPVEAFAQRLQKWAFNSDYMMKIAPHVQGRVETFSQVVPLGGFFFEGALKLDTKLFESKKLSADQVRQVLQL ILWKLESLRQWEKERITGCIQSVVDALELKLRDAMPLMFAAITGQASSVSVLDAMEILGPDLTRYRLRQALDLLGGVSKKENKEWEKQLATIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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