Strain | Pseudomonas sp. URMO17WK12:I11 H041DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGTGCCTTACGAGACCGATGAGGAGCGCGACTGTGCCCAAGGCGTCGGCGGCTACGCTAGGCCCATGCCGGCAAGCTGGATGCAGCGTCAGGCTCAGGC CGTACACGAGCGTGCCCGGCAAGCGGATATCGTCATTACCACCGCACTGATCCCTGGCCGCAAGGCGCCTACGCTATTAAGCGCCGAAACGGTCGCCCAC ATGAAACCAGGTTCGGTAGTCATCGACCTGGCAGCGGCTCAGGGCGGCAACTGCCCACTGACCGTGGCCGACGAGGTCGTGCATGCCCATGGCGTCACCA TCGTGGGCCCAACTAACCTACCCGCCCTGGTCGCAGCGGACGCTTCCGCCCTTTACGCACGCAACCTGCTGGACTTCACAAAACTGCTGTTCGACAAGGA CGGCGCCCTGACCATCAACCTCGAAGACGACATCGTCGCGGCCTGCCTCATGTGCCGCGACGGTCAAATCGTCCGCAAGAACGGCTGAGGAGCACGACAA
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DNA Sequence for Gene |
>H041_RS0100030
ATGGAAGACATGCTGATTTCCCATGGCATTTATAACCTCATCATTTTCGTGCTGGCCATTTATGTGGGTTACCACGTGGTCTGGAATGTCACACCGGCGT TGCACACCCCGCTGATGGCAGTCACCAACGCGATATCGGCCATCGTTATCGTCGGTGCCATGCTTGCCGCTGCGCTGACGGTCACGCCTGCCGGAAAGGT GATGGGCACGCTCGCCGTTGCTCTGGCTGCAGTCAACGTATTTGGCGGGTTCCTGGTCACCCGCCGCATGCTTGAAATGTTCAAGAAAAAGGTCAAGAAC GAGGGGCAGAAGTCAGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCATGAATCTGGTAACACTTCTGTATCTGGTCGCCTCGGTGTGTTTCATCCAGGCGCTCAAGGGCCTGTCGCACCCCACTACATCCCGGCGTGGCAACCT GTTCGGCATGATCGGTATGGGTATCGCGATCCTCACCACGGTCGGTCTCATTTATAAGCTCGGTGCTGAGCTGGCCACGGCCGGCATCGGCTATGTGATC GTCGGGCTGCTGGTGGGCGGCACCGCAGGCTCGGTGATGGCCAAACGCGTCGAGATGACCAAGATGCCTGAGCTGGTCGCCTTCATGCACAGCATGATCG GCCTTGCCGCGGTATTCATCGCCATTGCCGCAGTGCTCGAGCCCCAGTCGATGGGAATCGTCGCCGCCATCAGCGATCCAATCCCTACGGGTAACCGCCT GGAGCTGTTCCTGGGGGCTGCCATTGGTGCCATTACCTTCTCGGGCTCGGTGATCGCCTTCGGCAAGCTATCGGGCAAATACAAGTTTCGCCTGTTCCAA
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Amino Acid Sequence |
>hypothetical protein
MEDMLISHGIYNLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPAGKVMGTLAVALAAVNVFGGFLVTRRMLEMFKKKVKN EGQKSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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