Pseudomonas sp. URMO17WK12:I3, H038_RS0120810
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I3 H038DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGGCAAGGTCTCCGGCGAGGGTGACAAGACGCTGTCGTTGCGTGTCGATGGCACCGATATCCAGAGCCAGGGCACCCTGCTGTTCACCGACATTTCGGT CGACCGCAGCACCGGGCAGATCGCCCTGCGCGGGCGCTTCGACAACCCGCAGGGCGTGCTGCTGCCAGGCATGTACGTGCGCGTACGCACGCCGCAAGGG CTCGATCAGGAGGCCATTCTGGTACCGCAGCGCGCAGTGCAGCGTTCGGCGGACGGCAAGGCCAGCGTGATGCTGCTGGGCGAAGGCAACAGCGTCGAAG CGCACCCGGTCACCACCGGCGCCATGCAGGGCGCACGCTGGCAGATTACCGACGGTCTCAAGGCCGGCGACAAGGTCATCGTCAGTTCCCTGAGCGCGAT CCAGCCAGGAGCCAAGGTAGTACCCCGTGAAGAAGGCGCGCCAGCGCCCGACGCGCCCGCCAACCCTTCACAGGCGCAATAAGCCGGAGCCCCTGACATG
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| DNA Sequence for Gene |
>H038_RS0120810
ATGTCTCTGTTCTTTATCCGGCGCCCTAATTTCGCCTGGGTGGTCGCGCTGTTCATCACCATGGCCGGCCTTTTGGCCATCCCCTTCCTGCCAGTCGCCC AATACCCCAACGTGGCGCCGCCGCAAATCACCGTGACGGCTACCTACCCGGGCGCCTCGGCCCAGGTGCTGACCGATTCGGTCACCAGCGTGATCGAGGA AGAGCTCAACGGCGCCAAGAACCTGCTGTACTTCGAGTCCACCAGCAACGCCAACGGCATCGCCGAGATCACCGTAACCTTCCAGCCGGGCACCGACCCG GAACTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAAAGGCCGAGGCGCGCATGCCCCAGGCCGTGCTGACCCTCGGTATCCAGACCGAACAGGCCACCG CGGGCTTTCTGCTGATCTATGCACTGAGCTACAAGGATGGCGGCGCCAACGACGACACCACGGCGCTGGCCGACTATGCCGCGCGCAACATCAACAACGA GATCCGCCGCGTGCCCGGCGTCGGCAAGCTGCAGTTCTTCGCCTCCGAAGCGGCCATGCGTGTGTGGATCGACCCGCAGAAGCTGGTGGGTTACGGCCTG TCCATCGATGACGTCAACAACGCCATCCGCGCCCAGAACGTGCAGGTGCCGGCCGGTGCTTTCGGCAGCACACCGGGCAGCGCCGAGCAGGAGCTGACCG CGACCCTGGCGGTCAAGGGCACCCTGGACAACCCCGAGGAATTCGCCGCCATCGTGCTGCGCGCCAACCAGGATGGCTCGCGCCTGACCCTGGGTGATGT CGCGCGCATCGAGGTCGGCAGCCAGGATTACAACTTCGGCTCGCGCCAGGACGGCAAACCGGCCGTGGCCGCTGCCGTGCAGCTGGCGCCCGGCGCCAAC GCCATCCAGACCGCCGAGGCGGTCAAGCAGCGCCTGACCGAGCTGTCCGCCGGTTTCCCGGAAAACGTGCAGTTCTCGGTGCCCTACGACACCTCGCGCT TCGTCGACGTGGCCATCGACAAGGTCATCATGACCCTGGTCGAGGCCATGGTGCTGGTATTCCTGGTGATGTTCCTGTTCCTGCAGAACGTGCGTTACAC GCTGATTCCGTCCATCGTGGTGCCGGTGTGCCTGCTCGGCACGCTGACCTTCATGTACATCTTGGGCTTCTCGGTGAACATGATGACCATGTTCGGCATG GTGCTGGCGATCGGCATCCTGGTCGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGGATCATGGCCGAAGAAGGCCTGGCGCCGGTGCCGGCGACCA TCAAGGCGATGGGCCAGGTGTCCGGGGCGATTCTCGGTATCACCCTGGTGCTGTCGGCAGTGTTCCTGCCGCTGGCATTCATGGCCGGCTCGGTGGGCGT GATCTACCAGCAGTTCTCGCTGTCGCTGGCGGTGTCAATCCTGTTCTCGGGTTTCCTGGCACTGACTTTCACGCCAGCGCTGTGCGCCACCATTCTCAAG CCGATCCCCCAGGGGCATCACGAGAAAACCGGTTTCTTCGGCTGGTTCAACCGCAAGTTCACCGGCCTGACCGGACGTTACACCAGACTCAACAGCAAGC TGGTACCGCGTGCCGGGCGCTTCATGTTCATCTATCTGGGCATCGTGGTGCTGATGGGTTTCTTCTATCTGCGCCTGCCCGAATCCTTCGTGCCGGTCGA GGATCAGGGCTACATGATCGTCGACATCCAGCTGCCGCCCGGCGCTACGCGCGAGCGCACTTCGGCGACCGGCAAACAGCTGGAGGAATTCCTCGCCTCC CGCGAAGCCGTGGCGACCTCGTTCCTGGTGCTGGGCTTCAGCTTCTCGGGCATGGGCGAGAACGCCGCCATCGCCTTCCCGCTGCTCAAGGACTGGTCCG AGCGCGACTCGGAGCAATCTGTCGAGGCCGAAACCACAGCGGTCAACGGCCGCTTCGCCAACCTCGATGACGGCGCCATGATGGCCGTTCCACCACCGCC GATCGAAGGCCTGGGCAACTCCGGCGGCTTCGCCCTGCGTCTTCAGGACCGCGGCGGCCTCGGCCGCGAAGCACTGTTGGCAGCCCGTGACCAGGTGCTC GGCAAGGTCAACGGCAACCCGCTGTTCCTCTACGGCATGATGGAAGGCCTGGCCGAAGCGCCGCAGCTGCGCCTGGTCATCGACCGCGAGCAGGCGCGCG CCCAGGGCGTCAGTTTCGAGTCGATCAGCAATGCGCTGTCCACCGCGTTCGGCTCCTCGGTGATCAACGACTTCGCCAACGCCGGGCGCCAGCAGCGCGT GGTGGTGCAGGCCGAACAGGCCGCGCGAATGACCCCAGAAAGCGTGCTCAAGCTGCACGTGCCCAACGACAGCGGCAATCTGGTGCCACTCAGCGCTTTT GTGACCACCCAATGGGAACAGGGCCCGGTGCAGGTGGCGCGCTACAACGGTTACCCGTCGATCCGCATCTCCGGCGACGCCGCCCCTGGCGTCAGCACTG GCGAAGCCATGGCCGAGCTGGAGCGCATCGCCGCCGAGCTGCCGGAAGGCATCGGTTACGAATGGACCGGCCTCTCCTATCAGGAGAAGGTCGCCAGCGG CCAGGCGGTGATGCTCTTCGCCCTGGCCATCGTGGTGGTGTTCCTGCTGCTGGTCGCACTGTACGAGAGCTGGGCGATTCCGCTGGCGGTGATGCTCATC GTGCCAGTCGGCGCACTCGGCGCGGTGCTCGCGGTGACCGCCATCGGTCTACCCAACGACGTGTACTTCAAGGTCGGCCTGATCACCGTGATCGGCCTGG CGGCAAAGAACGCCATCCTCATCGTCGAGTTCGCCAAGGACCTGTGGGAAGACGGCTACTCGCTTCGCGATGCCGCCATAGAGGCCGCGCGCCTGCGCTT CCGGCCGATCATCATGACCTCCATGGCCTTCATGCTCGGCGTGGTGCCACTGGTGATCGCCACCGGCGCAGGTGCCGCCAGCCAGCGTGCCATCGGCACC GGCGTGCTGGGCGGCATGTTCAGTGCAACGCTGCTGGGAGTGATCTTCGTGCCGATCTTCTTTGCCTGGGTGCTATCGTTGCTGCGTACCAAACCGCAGC AAACCGACAACCATCCGCTGCATAAAGCGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGATAGCCTTGGCGGCTATCGCCGATCAGTAGATGCGAGACAGCGCAGCCTTGGCGACCTTGATGCCTTCGCTGCGCTCCAGCTCGCCCTTCAGCGCC CCTTCAGCCCTGACGAAGCGCACATCAGTGATGCCCAGGAACTTGAAGAAGCTCTGCAGGTACGGCTCTTGGAAATCCATCGGCGCCATGGGCCCGTGGG AGTAGAAACCGCCGCACACCGATACCACGATCACGCACTTGCCGCCCGCCAGGCCGACAGTGCCGTGCTCGGTGTAGTTGAAAGTGCGCCCCACCTGGGC GATACGGTCGAGCCAGGCCTTCAGCTGGCTGGCAATGGAGAAGTTGTACATCGGCGCGCCGATCACCAGGATGTTGCAGGCCAGAAACTCGTCGACCAGT TGCTCGGAGAGCCGATGCTCGCCTTGTAACGCCTCGTCGGCATTGGCCAGCTCACGGTCTTCGAAGCCAGCGAAGATCGGCCCGGTCAGGTGATTGATGG
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| Amino Acid Sequence |
>acriflavine resistance protein B
MSLFFIRRPNFAWVVALFITMAGLLAIPFLPVAQYPNVAPPQITVTATYPGASAQVLTDSVTSVIEEELNGAKNLLYFESTSNANGIAEITVTFQPGTDP ELAQVDVQNRLKKAEARMPQAVLTLGIQTEQATAGFLLIYALSYKDGGANDDTTALADYAARNINNEIRRVPGVGKLQFFASEAAMRVWIDPQKLVGYGL SIDDVNNAIRAQNVQVPAGAFGSTPGSAEQELTATLAVKGTLDNPEEFAAIVLRANQDGSRLTLGDVARIEVGSQDYNFGSRQDGKPAVAAAVQLAPGAN AIQTAEAVKQRLTELSAGFPENVQFSVPYDTSRFVDVAIDKVIMTLVEAMVLVFLVMFLFLQNVRYTLIPSIVVPVCLLGTLTFMYILGFSVNMMTMFGM VLAIGILVDDAIVVVENVERIMAEEGLAPVPATIKAMGQVSGAILGITLVLSAVFLPLAFMAGSVGVIYQQFSLSLAVSILFSGFLALTFTPALCATILK PIPQGHHEKTGFFGWFNRKFTGLTGRYTRLNSKLVPRAGRFMFIYLGIVVLMGFFYLRLPESFVPVEDQGYMIVDIQLPPGATRERTSATGKQLEEFLAS REAVATSFLVLGFSFSGMGENAAIAFPLLKDWSERDSEQSVEAETTAVNGRFANLDDGAMMAVPPPPIEGLGNSGGFALRLQDRGGLGREALLAARDQVL GKVNGNPLFLYGMMEGLAEAPQLRLVIDREQARAQGVSFESISNALSTAFGSSVINDFANAGRQQRVVVQAEQAARMTPESVLKLHVPNDSGNLVPLSAF VTTQWEQGPVQVARYNGYPSIRISGDAAPGVSTGEAMAELERIAAELPEGIGYEWTGLSYQEKVASGQAVMLFALAIVVVFLLLVALYESWAIPLAVMLI VPVGALGAVLAVTAIGLPNDVYFKVGLITVIGLAAKNAILIVEFAKDLWEDGYSLRDAAIEAARLRFRPIIMTSMAFMLGVVPLVIATGAGAASQRAIGT GVLGGMFSATLLGVIFVPIFFAWVLSLLRTKPQQTDNHPLHKAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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