Pseudomonas sp. URMO17WK12:I3, H038_RS0116535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.160.20 - - - 14 180 2.3E-44
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 202 325 1.5E-41
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 215 321 7.87277E-49
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 250 265 2.1E-18
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 220 315 3.1E-23
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 265 281 2.1E-18
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 200 319 5.9E-34
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 220 242 2.1E-18
Pfam PF05736 OprF membrane domain IPR008722 Outer membrane porin F, N-terminal 1 183 2.4E-80
SUPERFAMILY SSF56925 OMPA-like IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel 35 183 3.14E-15
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 195 320 2.09E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.