Pseudomonas sp. URMO17WK12:I3, H038_RS0107785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I3 H038DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGCCATCGAGCCGGGCAAGCGCATGCTGTCGTCGATGAGCCCGAGCATCGTCACCCGTGACGGCAAGGTCAGCCTGGTGCTGGGCACGCCCGGCGGCTC GCGGATCTTCACCTCGATCTTCCAGGTGCTCAACAACGTTTACGACTTCAAGCTGCCCCTGGAAAAAGCCGTCGCCGCCCAGCGCGTGCACCACCAGTTG CTGCCCAAGGACACCATTTACTACGACGCCTACGCGCCGCTCACCGGCAAGGTCGCCGACGAGCTGAAGGCCATGGGCTACGTGCTCGAAGACCAGGGCT GGAACATGGGCGACATCCAGGCCATCCGCGTCGACGGGCGCAGCCTGCAAACCGCTTCCGATCCCCGCGGTCGCGGTGTCGGCATGGTGGTCAAACCCTG AGCGTCATGGCATGACCCACGTTCCACGGCACCGCTGCGCCCGCAGCGGTGACCGATCCGCCCTGCCCTTGCGCGGGCTGGTTCGGTCACGTTGACTGTG
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| DNA Sequence for Gene |
>H038_RS0107785
ATGCAATGCGCGTCCATCAGTCTCCCTGGGGTGCCACCCGCCTTGGCTGCCAAACCGCGCTACGTCCGCCACCTGTCGCTGACCCTGCTGATGCTGGCGC TGGTGGCTGCCTGCGGTTACGCCGGTTACTACCTGAGCGAGCAATCCGGCATTCGCAGCTTGGTCGACAGCGGTGAGCGCCAGCTCGAGCTCAATGCCCG GGCGGTGGAAAGCGAGATCAACAAGTACACCTACCTGCCCAGCCTGCTGGAGCTGGAATCCAATGTCAGCCGCCTGCTGCTGACACCCGACGCCTACCGG CGCCAACGCGTCAACGACTACCTCGAAGGCCTCAACCAGCGCAGCGGCAGCCTGGCCATCTACGTGATGGACACCGAAGGTCGGGTGCTGGCCACCAGCA ACTGGCGCCAGGCCGATAGCTACCTGGGCGAGGACCTGTCGTTCCGCGCCTATTTCCAGGATGCGCTCAAAGGCCAACAGGGGCGCTTCTACGGCATCGG CAGCACCACCGGCGAGCCCGGCTATTACCTGTCCCACGGCCTGCGAGCCAACGGCCGGATCATCGGCGTGGCGGTGGTCAAGGTGCGACTCGACCCGCTG GAGCAGCGCTGGCAGCGGGCGCGGCTGGAAGCCTACGTCAGCGACGAGAACGGCATCATCATCCTTTCCAGCGACCCGATGCGTCGGCTCAAGGCCGTGC GCCCGCTGGACCCGGACACCAAGGAGCGCCTGGCGCGCAGCCTGCAATATCACTGGTCGTCGCTCGACGAGCTGATGCCTCTGGCGCGCGAGCAGTTGGC CGACGGCGTCGAGCAGGTCGGCTTCGCCGGCCACAACGGGCAGGATGCCAGCGAGGTCACCCACTACCTGGCCCAGAGCCGCCCGCTGGAAGACACGCCC TGGCACCTGACCCTGCTCAGCCCGCTGCAGGACCTGCGCCGCGAGGCGGTCAGCCACGGCATGCTGGCCGCCGCCGGCTTCGCCCTGCTGGCCTTTCTGC TGATCGCCTGGAACGAGCGCCGCAAGGTGATCGCCACCCGCCTGGCCGCCCGCGAAGCCCTGCAGCGCGCCAACAGCGAGCTGGAGCGCAAGATCACCGA GCGCACCGCCGACCTGCGTGCCAGCAACGAGCGCCTCAAGGCGCAGATTCGCGAGCGCCGCCAGGCCGAGGAAACCCTGCGCCTGGCCCAGGACGAGCTG GTGCAGGCCGGCAAGCTGGCGGTGATCGGGCAGATGTCCACCAGCATCGCCCACGAGCTCAACCAGCCGCTGGCGGCGCTGCGCACGCTGTCCGGCAACA CCGTGCGTTTCCTGTCGCGCGGCGCTTACGACGTGGCCACCACCAACCTGCAGACCATCAACGAGCTGGTCGACCGCATGGGCAGAATCACCGGCAGCCT GCGCGCCTTCGCCCGCCGCGCCAACGACGGCGGCGAAGCCAGCCTGAGCAAGGCCGTGGACGCCGCGCTGCAGGTGGTGCAGCCGCGCCTGGAGCGCACG CCGCTGACCATTCACCGCGAGTTCGCCGACGCCCGCCTGGCGATCAACCAGACGCGCCTGGAGCAGATTCTGGTCAATCTCATCGCCAACGCTGCCGATG CCATGAGCGCCCAGACTGACCGCCAGCTGTGGTTGCGGGGCCACGCCGAGGGCGAGCGCTATCGCCTGCGCGTGCTCGACAATGGCCCGGGCATCGCCCC CGAAGACCGCTCGCACCTGTTCGAGCCGTTCTTCACCACCAAGCCGGGCGAGCAGGGCCTGGGGCTCGGCCTCACGCTGTCCGCCAGCCTCGCCGCGGCC GCCGGCGGCAACCTCAGCGCCGACCATCCGCCCGAGGGCGGCACCGCTTTCGAACTCAACCTGCCGCAGGTTGCCGCTGCTTTGGAGACACCCGATGAAT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGACCTCACCGTGCTGATCGTCGAAGACGACCCCCACGTGCTGCTCGGTTGCCAGCAGGCCCTGGCCCTGGAAGACATTCCCTGCGAAGGCGTGGGCAGT GCCGAAGACGCCCTGCAGCGCATCGGCGCGGACTTTCCGGGCATCGTCATCAGCGATATCCGCCTGCCCGGCATGGACGGCCTGCAACTGCTCGGCGAAC TCAAACGCCGCGACCCGAGCCTGCCGGTGGTGCTGATCACCGGCCATGGCGACATCGGCATGGCGGTCGGCGCCATGCGCGACGGCGCCTACGATTTCAT GGAAAAGCCCTTCTCGCCCGAGCGCCTGGTCGACGTCGCCCGCCGCGCCCTGGAGCAACGCAGCCTGGCCCGCGAGGTGTCGTCGCTGCGCCGCCAGCTG GCCGGCAAGCAGGCCCTGGAGCAGCGCCTGATCGGCCGCTCGCCGGCCATGCAGCAACTGCGCGAACTGATCGCCAACGTCGCCGATACCTCGGCCAACG
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| Amino Acid Sequence |
>histidine kinase
MQCASISLPGVPPALAAKPRYVRHLSLTLLMLALVAACGYAGYYLSEQSGIRSLVDSGERQLELNARAVESEINKYTYLPSLLELESNVSRLLLTPDAYR RQRVNDYLEGLNQRSGSLAIYVMDTEGRVLATSNWRQADSYLGEDLSFRAYFQDALKGQQGRFYGIGSTTGEPGYYLSHGLRANGRIIGVAVVKVRLDPL EQRWQRARLEAYVSDENGIIILSSDPMRRLKAVRPLDPDTKERLARSLQYHWSSLDELMPLAREQLADGVEQVGFAGHNGQDASEVTHYLAQSRPLEDTP WHLTLLSPLQDLRREAVSHGMLAAAGFALLAFLLIAWNERRKVIATRLAAREALQRANSELERKITERTADLRASNERLKAQIRERRQAEETLRLAQDEL VQAGKLAVIGQMSTSIAHELNQPLAALRTLSGNTVRFLSRGAYDVATTNLQTINELVDRMGRITGSLRAFARRANDGGEASLSKAVDAALQVVQPRLERT PLTIHREFADARLAINQTRLEQILVNLIANAADAMSAQTDRQLWLRGHAEGERYRLRVLDNGPGIAPEDRSHLFEPFFTTKPGEQGLGLGLTLSASLAAA AGGNLSADHPPEGGTAFELNLPQVAAALETPDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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