Pseudomonas sp. URIL14HWK12:I7, H032_RS0128200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00006.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGGGCAAGACCATCAGCCTCGAACAATCAATTGATGCGCTCATGAACATGGATCGGTTTGACACGGCAGGGGTGACGGTCGTGACGGAGTTCTAAGTG GTAACGACGACGTTCTCCACTATCAACTGCGCTCGAGCGCAGGAATGCAGGCAATTCGTTGCCTGCATCTCAGCGGGGGAAGGTAAGGCTCCTAAACCGG ACGTTTAAGCTCCAGATGTAAAATATATTCTCATCTGTCATCCGCGCGCCTTTGCAAGCACATTGTATTAGGACGGTGATTGTTCAGGTCGACGAGCGCT CAATACTTACTTATCGAAAACGTCTCGCTGCCAGGGCCTGAGGGCTGAATGGCGGGGGACGATCTATCCCATATATCAAAAATACATATAAACAATAAAA AATTGTTCCAATAGATATAGGACAAGGCGCCGCCAAAATAATATCCTAATTGAAAGAAAATAATTTCGCAATCCGAAAAAATCAAAAAAGAGCGAAAAAA
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| DNA Sequence for Gene |
>H032_RS0128200
ATGATCAAGACTCCAAAGCATTCAGAAGGCAGCTCCGATCCGATCCAGGGTTGGGACGAAAAGAAGGCTCGAAGCACCGTTCAATCCTTGGCCAAGGGGT TTCGCGTACTGGAGTCGTTCACTGCCGAAAACGATGAGTTGACCTTGAGTCAGATCGCTGCGACGGCCGATCTTGATCCTGGTACGACCTTCCGCATGCT CAACACGTTGGTAGATTTGGGGTATGTCTCCAGAATTCCGGAAAGCCGTCGTTTTGCGTTGACGCTCAAGGTGCTGGATCTGGGCTTTCATGCTATAGCC CGGACTGATTTGCGCAGCATTGTGCGACCTATCCTCCGAAGCCTGGTCAGTGAAACCAGCGAGGCTGCCAGCTTTGCCGTCCTGCAGGGCGCCGATGTGC TCTACCTGGAGCGGGTGCGGGCGGGCATCACCCGATTGGGCGTGGATATCCGCATCGGCACCACGGTGCCTGCAACCCAGACGGCCATCGGCCAGTCGAT CCTTGCCTTCCTGCCGGAGCATCAGGTGCAGAAAGTCCAAGAACTCACCCCCACGACGCCATTCATCATGAAGCCACACGCCCTGGAGCGTCCGCTGTCG GAGTTGCTTGGGCAAATTCGCGACAATGGCTTCGTGTTGACTGAATCCCTGTTCACCGAGGGATTGAGAATTCTCGCGGTCCCCGTGCTGGACATCGACG GATATCCAGTGGGAGCGATCAGCATTGCCGCCCCTTCAGTCCGGTGTACGGCGGACGAGCTTAAAAGCCGCGCACTGAGCTCTACCCTGGAAGCTGCCAA GGATATTGGCAAGGCACTGGAGGCCAATGGAAGTATCGGTTCGAACTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGCTAGTCATGATTACACGGGCTCACGCTAAAGCCCGTTAGTTACTCAATGAACTTCAAGCATTGTGAAATTCACAACGCTCGCACCTGCACGCCCCGA CAATATTGAAAATAAGAAGGAAGTGCCATGTTGATGCAAAACTTAGAAACAGAACCTGTGACTGAAGGGCTTAAAAGCCAAGCGAATATCAGTGCGAGAC TTGAACGTTTGCCTATTACCCGGCAGGTCTTCTGGGCCAGGAATATTATTGGTGCCGCCACATTCTTTGATGGTTATACAGTCATCGCGATTGCCTATGC GATGCCGGTATTGGCCAAGGAATGGAACCTGACCGCGACCCAGATCGGCATGATTTTATCGTTCGGTTACCTGGGCCAGTTGTTGGGTGCGGTGTTCTTT GGTTGGTTGGCTGAACGTATCGGGCGGATGAAAGTGCTGACGTTCACCATTCTTCTATTCGTTGCCATGGATGTGGCCTGTCTGTTCGCCTGGAGCGCCG
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| Amino Acid Sequence |
>IclR family transcriptional regulator
MIKTPKHSEGSSDPIQGWDEKKARSTVQSLAKGFRVLESFTAENDELTLSQIAATADLDPGTTFRMLNTLVDLGYVSRIPESRRFALTLKVLDLGFHAIA RTDLRSIVRPILRSLVSETSEAASFAVLQGADVLYLERVRAGITRLGVDIRIGTTVPATQTAIGQSILAFLPEHQVQKVQELTPTTPFIMKPHALERPLS ELLGQIRDNGFVLTESLFTEGLRILAVPVLDIDGYPVGAISIAAPSVRCTADELKSRALSSTLEAAKDIGKALEANGSIGSNF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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