Pseudomonas sp. URIL14HWK12:I7, H032_RS0126235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCCTGTCCGGGGCGACGATCCTGGGGGACGGCCGGGTGGTGTTGATTCTCGACCTGCTCGCGCCGATCCGCGCCTTGCCCCACCAGGTCCCGCGCCGC CAAGTGCCGGTAGAAGGCGAGGGCGAATCGCAACGGCCGCTGCTGGTGCTGGTGGTGGACGACTCGGTGACCGTGCGCAAGGTCACCAGTCGCCTGCTGG AACGCCACGGCATGCACGTCCTGACCGCCAAGGATGGCGTGGATGCCATGGCGCTGCTGGCCGAGCATGCCCCGGACCTGATGCTGCTGGACATCGAGAT GCCGCGCATGGACGGCTTCGAAGTGGCCACGCAAGTGCGCAACGACCCGCGCCTGGCGCATTTGCCGATCATCATGATCACCTCCCGCACCGGCCAGAAA CACCGCGACCGCGCCATGGCCATCGGCGTCAACGACTACCTGGGCAAGCCGTACCAGGAATCGGTGCTGCTCGACAGCATCGCGTACTGGAGCAAAACAC
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| DNA Sequence for Gene |
>H032_RS0126235
ATGCATGACCTGCATCTTCACTCGCGCACCAGCCCACTCACCGGCCTGTTGTTGCCATTGGCTGACCGGCACCTGGTGTTGCCCAACGTGGCCGTGGCCG AACTGATCGACTACCAGAGCAGCGTATTCGATATGGACACCCCGCCGTGGTTCCTGGGCTGGGTGAGCTGGCGTGAACGGCAAATCCCGTTGCTGAGCTT CGAGTCGGCCTGCGGCCAGAAGACCGTGATTGGCGAGCGAGTGCGCATCGTCGTGCTCAACGCCCTCGGCGGACGGCCGGAGCTGCGTTTCATAGCGCTG CTGGTGCAAGGCATCCCACGCTCCTACAAGCTCGACAGCCAGTTGAGCTACGTCGACGTGCCGCTGTGCGGGTTGGAACAGGCGGCGGTGCAAGTTGGGG AACACGTGGCGAAAGTGCCGGATTTGTTGGCACTGGAGGAGTTGGTGATGGCTGCGGGCCTGATTCAGCCCCACAAACCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCATACGAATTCCCAATGTGGGAGCGAGCTTGCTCGCGATGGCGGCCTGACAGCTGGCCAAAATTTTGTTGATCGGGTACATATCCATTGCTGCGGTAA CGGCTGCTTAGGGTTCCGCCCTTACGGCGGGTCACTTTTTTCAGACGCCAAAAAAGTAACCAAAAAGGCTTTGCCCCACCACTCGGTGCCTCGCCTAGGC TCGGCATGCCCGAACGAAGGCATTGCTCCGTGGGCCCACTCCACAATGCCTGCGTTCGGCCAGCGTGGTTAACGGGGCGCCGAGATCAACGTCCATCGCG AGGCGGCCTGACAGCCGGCCTGGCTCTTGCGGGTGTACCCCAACCAGATTTGTGTGAGCAGGACCTGTGGGAGCAAAGCTTGCTCGCGAGGCGGCCTGAC AGCCGACCTGCGATTGCAGGTGTACCCCAATCCAATTGTGTGCGGGCTTGCTCGCTACCACAAAGGTTCGTACCAATCCGGCAACCATTACTCCAACCGT
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| Amino Acid Sequence |
>chemotaxis protein
MHDLHLHSRTSPLTGLLLPLADRHLVLPNVAVAELIDYQSSVFDMDTPPWFLGWVSWRERQIPLLSFESACGQKTVIGERVRIVVLNALGGRPELRFIAL LVQGIPRSYKLDSQLSYVDVPLCGLEQAAVQVGEHVAKVPDLLALEELVMAAGLIQPHKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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