Pseudomonas sp. URIL14HWK12:I7, H032_RS0126230
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCGAAGTGGTGCGCGGTGCGCGACTGGCCCAGGACGCCGGCGTTGCCCTGGAAGAAATCGAAGGCGTGTCCAAGACCCTGGCGGCGCTGATCCAGAG CATTTCCAATGCGGCGCAGCAACAGACCACCTCGGCGGGGCAGATTTCCTTGACCATGAACGTGATCCAGCAGATCACTTCGCAGACTTCATCCGGTTCC ACCGCCACTGCCGAGAGCATTGGCAACCTGGCGAAAATGGCCAGCCAGCTGCGTCGTTCGGTGTCGGGGTTCACGTTGCCGGCGGCAGCGGCTGGCGATG AGGAAAAGGGGTGACCAACCGGATCCATCCGTTGGAAAAGGCTTTTTGTGGCGAGGAGGTTTCTGTGGGAGCAAGGCTTGCCCGCGATGAAGATAACGCG GTTCTTCGGGAACCGAGGTGTTTGCATCGCGAGCAAGCTTTGCTCCCACAGGTAAATCCCTTCCCCGCGGGCGCGTTGTGTTCTCCTGATTGGAGTGGTT
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| DNA Sequence for Gene |
>H032_RS0126230
ATGGGTGATCGGCACGACTATGTGGCCCTGGAATGGGTCAAGGGCGAGATTGCCGAAACGCTGAAGCAGGCTCATCTGGCCCTCAACCGCCTGGTGGACG ATCCGCAGGCGTCGGACGCCCTCGGGCAATGCCTGGCCTGCATTCACCAGGTCCACGGCGGCCTGCAGATGGTCGAATTCTACGGTGCGGCGCTGCTGGC CGAGGAGATGGAGCAACTGTGCGCCGCCCTGCAGGACAACCGCGTCACCCATCGCGACGAAGCCATCAGCCTGTTGAGCCAGGCCCTGGGGCAGTTGCCG ATCTACCTGGACCGCGTACAAGGTGCCCGTCGCGATCTGCCGCTGGTGGTGCTGCCCTTGATCAACGACCTGCGCAGTGCCCGGGGCGAGAGCCTGTTGT CGGAAACCAGTCTGTTCAGCCCCGAGTTGCCCGATATTGCGCCGCTCAGCGACGAGGCCTTGCAGCGCCTCGAACCCGCTGACCTGCCAAACACCTTGCG CAAATTGCGCCAGACCCTGCAAATGGCCCTGGTGGGCCTGCTGCGCGAACAGGACGACGCAACCCACCTCGGTTACCTGGCCAAGGTCTTCCATCGCCTG GAAACCTTGTGTACTGGGGCGCCGCTCAATGCGTTATGGCAGGTGGCCTCGGCGCTGGTCGAAGGCATGCGTGACGGACGTATCGCCAACAGCCCGGCGC TGCGCAGCCTGTTCAAGGAAGCCGACAAGGAACTCAAGCGCCTGCTGGACCAAGGCATGCCAGGCATCAATCAGCCGGCACCGCCCCACCTGCTCAAGAG TTTGTTGTTCTATATTGCCAAGGCCGAACATCCCAGCGGGCAGATGCAGATCATGAAAGAACGCTACTCACTGGACGACGCGCTGCCCGACAGCGCCATG GTCGACGAAGAACGCGCGCGCCTGGCCGGGCCCGACCGCGATGCCATGCGCTCGGTGCTTGCCGCGCTGTGCGAGGAACTGGTGCGGGTCAAGGAGCGCC TGGACCTGTTCGTGCGCAGCGATCGCCAGCACGCCTCGGAGCTGGACAGCCTGTTGGCGCCGCTGCGGCAGATCGCCGACACCCTGGCGGTGCTCGGTTT TGGCCAGCCACGCAAGGTCATCATCGATCAACTGGCCGTGGTCCTGAGCCTCGCCCAGGGCCAGCGCAAGCCGGATGACGCGACCCTCATGGACGTCGCC GGGGCCTTGCTCTACGTCGAGGCGACGCTGGCCGGCATGGTCGGCACCGTCGAGCCCGAGAGCCGCGAAGACACCCACCTGCCCACCACCGACCTGACCC AGATCCACCAGATCGTCATCAAGGAAGCCCACACCTGCCTGCAACAGGCCAAGGACATGATCGTCGACTACATCGACGCGGACTGGAACCGCGAGCAACT GCAGCCCTTGCCGGCGTTGCTGACCCAGGTGCGTGGCGCGCTGGCGATGATTCCCCTGAGTCGTGCCGCCAGCCTGGTGGAGGCTTGCAACGGTTTCATC CGCGAGCATCTGCTGCTGGATCAGGCCCAGCCGGGCTGGGAAGAACTCGACCACCTGGCTGACGTGATCACCGGTCTCGAATACTACCTGGAGCGCTTGA GCGAGGACCCGGAAACCCCCGGCGAGCCGTTGCTCGACGGGGTCGAGCGGAGCTTGGCTGCGCTCGGTTATTTTCCTGACGAAGCGCGAGTGCCGGTGCT CGACGATGTATTGAGCCCCAACGAAGCCCAGGTCATGCAGGACTTGCAGGAATGGGACGACCCGCAGACGGTGCAATCCTTGGCCGAGGTGCTGGCCAGC CCGATCTCGGCGGTCAATCCGCCAGCCAAGAGCACCCCGGGCAGCCTGTTGCCGCCACCGTTGGATGAAAGTCCGGTGGACGATGAGTTGCGCGAGGTCT TCCTCGAGGAAACCGGCGAGGTGCTGGACGTCCTGCGTGAATACCTGCCGCGCTGGAGTGCGCATCCCGACGACCACGGCGCCCTGAGCGAACTGCGCCG GGCCTTCCACACCCTCAAGGGCAGTGGCCGGATGGTCCGGGCGCTGGTGCTGGGTGAACTGGCCTGGGCCGTGGAAAACCTGCTCAACCGGGTCCTGGAG CGCAGCGTCGAGCCGCAGGCCTCGGTCCGCCAGTTGATTGAAGACACGGTGCAGTTGTTGCCGGCCCTGGTGGCCGAATTCGCCGCCAATCACCAGCGCC AGCGCGACGACGTCGACCGCTTGGCCGCCCGCGCGCATGTCCTGGCCAAGGGCGGCGATGAGAAGGATGAAGACGAGCAGGACGTGGCCGCCCTCGATCC GCTGCTGTTGAAGATCTTCGACAGCGAAGCCCAGGGCCACCTCGCCAGCCTCAATCGCTTTCTCGATCAGTCGGCCGACCACCTGCCCCTGCAGGCCAGT GATGAGTTGCAGCGGGCCTTGCATACGCTCAAGGGCAGCGCGTCGATGGCCGGCGTGCTGCCGATCGCCGAGCTGGCCGGGGCGATGGATGAGCTGGCCC GGGAATACCGGGCGCATCTGATTGCCCTCGATCTGGATGAGGTCGAATTGCTGCTGGAAGCCGAAGGGCTGCTGCGCCGGGGCCTGCGCCAGTTGCACAG CGAGCCGCTGGCAGCGATCCCTGGCGCCGAGGATCTGATCCAGCGCGCCCAGGCCCTGCTGGCCGAGCGTCTGCACGCCGCCAACAGCGCGCCGGACAAA GCGCTGCGGACCAAGCGCGACCCACAACTGATCAACAACTTCCTAGCCCAGGGCATGGACATCCTGCTGGACGCCGAAAGCCTCTTGCAGCGCTGGCAGC AGCACCCCGGCGAAGGCCAGGAACTGAGTGCGCTGCTCGATGAGCTGACCACCCTCGGCGAAGGCGCGCACCTGGCCGACTTGCACCCGGTGGACGAACT CTGCGAAGCCTTGCTCGACCTCTACGGTGCGGTAGAGGAAAGCAGCCTGGCGGTCAGCGATGAATTTTTCCAGGAAGCCCAGCGCGCCCATGAAGCGCTG ATCGATATGCTCGATGAGCTGGCGGCCGGGCAGCATGTGCATCCGCAGCCCGAGCGGGTACAGGCCCTGCGTCGCTTGCTTCAGGAGAGCCTTGATCCAT CGGCCACCGGCCTGATCCGCAGCGACGGCAGCCGCACCCTGAGCATCCGCGAACTGGGCCACGCGACGGCGGAAATGGAGCGTGACGCGCCCGTCGATAC CTCGATGGAAGATGACCTCGCGGCGATTTTCCTCGAAGAAGCCCAAGACATCCTCGAAAGCGCCGCCCAGGCCTTGCAACGCTGGTTGGCCGATCCGGAT AACGGCGCACCGCTGTCCTCGCTGCAACGTGACTTGCACACCCTCAAGGGCGGTGCGCGAATGGCCGACATCCGGCCGGTGAGCGACCTGGCCCAGGAGT TGGAAAACCTTTACGAAGGGCTGGTGGACCGCCGCTACAGCTACAGCGAGGAACTGGCGCAACTGCTTGCCAGCAGCCACGAACGCCTCGACCTGTTGCT CGGGCAGTTGCAACAGGGCCAGCCGTTGGGCGATCCCGTTGCGCTGATCGACGCCATTCGACGGTTCCGCCAGGACAAGCCGAACGCCATCGAGACGAGC GCAGCGGCCCAGGCCGACGGCGCCGGCCATGATCCCGAGTTGCTGGAAATCTTCCTTGAAGAAGGCTTCGACATCCTCGACAGCTCGGGCGCGGCGCTGC TGCGCTGGCAGGAAGAACCGTCGAATCGCCAGGCCGTGGAAACCTTGCTGCGGGATTTGCACACCCTCAAGGGCGGTGCGCGCATGGTGGAAATCGGACC CATCGGCGACCTGGCCCACGAGTTGGAAAATCTCTACGAAGGCCTGTCGGCAGGCCTGCTTCAGCCGAGCCCGGCGCTGTTCACTTTGTTGCAAAGCAGT CATGACCGATTGGCGCAGATGCTCGATGCAGTACGCGCCGGCCACCCGTGCCCGTTGGCGGACCGACTGATCGCGCAGATCCAGGCGGTGAATCATCCCC AGGAGAATGCTGCACCGCAGGCTGTCTCGGCGCCGGAGCCGGTGCCCACTCCCATCGTCAGCCCGCCTGCGGCGCCTGCAAGACCGGACCCCAGCGCAGC GGGCGACGGTGCGGACATGGTCAAGGTATCCGCCGAACTGCTCGACGACCTGGTGAACCTGGCGGGCGAAACGTCGATCTTCCGTGGGCGTATCGAACAG CAGGTCAACGACGGGCGCGTGGCCCTGGGCGAAATGGAAACCACCATCGAGCGCATGCGCGATCAGTTGCGGCGCCTGGATACCGAAACCCAGGGGCGGA TTCTCAGCCGGCAACAGGTGGAGGCCGAGCGCCTGGGCTATGAAGAGTTCGACCCGCTGGAGATGGACCGCCACTCCCAGTTGCAGCAGTTGTCCCGGGC ACTGTTCGAGTCCGCCTCGGACTTGCTTGAGCTCAAGGAAACCCTCGACCGCAGCAATCACGATGCCGAGGTCCTGCTGCAACAGCAGGGGCGTATCAAC ACCGAGCTCCAGGAAGGCCTGATGCGTACGCGCATGGTGCCGTTCGAGCGCATGCTGCCACGGCTCAAGCGCATCGTCCGGCAAGTGGCGCAGGAGCTGG GCAAGGACGTGGAATTCCTGGTCGGCAACGCCGACGGCGAGATGGACCGTAACGTGCTGGAGCGCATGGCTGCACCTCTTGAACATATGCTGCGCAACGC CGTCGACCACGGCCTGGAGCCGGCTGACGTGCGCATCGCCGCCGGCAAGCCGGCCCGAGGACGTATCAGCCTCGATCTGTCCCGGGAAGGCGGCGACATC ATTTTCGACATCCGCGACGACGGTGCCGGGGTGCCGCTGGAGGCTGTGCGGAACAAGGCGATCAAACGTGGCTTGCTGGCGCCGGACAGCGACATCAGCG AGCGCGACGTGCTGCAGTTCATCTTGCAACCAGGGTTTTCCACGGCCGAGAAAATCACCCAGATATCCGGGCGCGGCGTCGGCATGGACGTGGTCCACGA AGAGGTTCGGCAACTGGGCGGCAGCATGGTCATCGATTCCACGCCGGGGCAGGGCGTGAATTTCCGCATTCGCCTGCCGTTTACCGTGGCGGTGAACCGG GCGTTGATGGTGCACTGTCACGAAGACCAATACGCGATCCCGCTGAACACCATCGAGAGCATTGTCCGGGTGTTGCCCGCCGAACTGGACGGCTATTACC AGCTCGACCCGCCGACCTACACCTATGCCGGGCAGCGTTACGAGTTGTGCTACCTCGGTGAGCTATTGAAAACCGGCGCCCGGCCGAAACTGCTGGGCCA GAGCCAGCCCTTGCCGGTGCTGCTGGTGCAGTGCAACGAGCGGCACGTCGCCGTGCAGGTGGACGCTACCGCCGGGACCCGGGAGATCGTGGTCAAGAGC CTCGGCCCGCAGTTCTCGGCGGTACAGGGCCTGTCCGGGGCGACGATCCTGGGGGACGGCCGGGTGGTGTTGATTCTCGACCTGCTCGCGCCGATCCGCG CCTTGCCCCACCAGGTCCCGCGCCGCCAAGTGCCGGTAGAAGGCGAGGGCGAATCGCAACGGCCGCTGCTGGTGCTGGTGGTGGACGACTCGGTGACCGT GCGCAAGGTCACCAGTCGCCTGCTGGAACGCCACGGCATGCACGTCCTGACCGCCAAGGATGGCGTGGATGCCATGGCGCTGCTGGCCGAGCATGCCCCG GACCTGATGCTGCTGGACATCGAGATGCCGCGCATGGACGGCTTCGAAGTGGCCACGCAAGTGCGCAACGACCCGCGCCTGGCGCATTTGCCGATCATCA TGATCACCTCCCGCACCGGCCAGAAACACCGCGACCGCGCCATGGCCATCGGCGTCAACGACTACCTGGGCAAGCCGTACCAGGAATCGGTGCTGCTCGA CAGCATCGCGTACTGGAGCAAAACACATGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGCATCTTCACTCGCGCACCAGCCCACTCACCGGCCTGTTGTTGCCATTGGCTGACCGGCACCTGGTGTTGCCCAACGTGGCCGTGGCCGAACTGATC GACTACCAGAGCAGCGTATTCGATATGGACACCCCGCCGTGGTTCCTGGGCTGGGTGAGCTGGCGTGAACGGCAAATCCCGTTGCTGAGCTTCGAGTCGG CCTGCGGCCAGAAGACCGTGATTGGCGAGCGAGTGCGCATCGTCGTGCTCAACGCCCTCGGCGGACGGCCGGAGCTGCGTTTCATAGCGCTGCTGGTGCA AGGCATCCCACGCTCCTACAAGCTCGACAGCCAGTTGAGCTACGTCGACGTGCCGCTGTGCGGGTTGGAACAGGCGGCGGTGCAAGTTGGGGAACACGTG GCGAAAGTGCCGGATTTGTTGGCACTGGAGGAGTTGGTGATGGCTGCGGGCCTGATTCAGCCCCACAAACCCTGAGGCATACGAATTCCCAATGTGGGAG
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| Amino Acid Sequence |
>sensor histidine kinase
MGDRHDYVALEWVKGEIAETLKQAHLALNRLVDDPQASDALGQCLACIHQVHGGLQMVEFYGAALLAEEMEQLCAALQDNRVTHRDEAISLLSQALGQLP IYLDRVQGARRDLPLVVLPLINDLRSARGESLLSETSLFSPELPDIAPLSDEALQRLEPADLPNTLRKLRQTLQMALVGLLREQDDATHLGYLAKVFHRL ETLCTGAPLNALWQVASALVEGMRDGRIANSPALRSLFKEADKELKRLLDQGMPGINQPAPPHLLKSLLFYIAKAEHPSGQMQIMKERYSLDDALPDSAM VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHASELDSLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLAQGQRKPDDATLMDVA GALLYVEATLAGMVGTVEPESREDTHLPTTDLTQIHQIVIKEAHTCLQQAKDMIVDYIDADWNREQLQPLPALLTQVRGALAMIPLSRAASLVEACNGFI REHLLLDQAQPGWEELDHLADVITGLEYYLERLSEDPETPGEPLLDGVERSLAALGYFPDEARVPVLDDVLSPNEAQVMQDLQEWDDPQTVQSLAEVLAS PISAVNPPAKSTPGSLLPPPLDESPVDDELREVFLEETGEVLDVLREYLPRWSAHPDDHGALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLNRVLE RSVEPQASVRQLIEDTVQLLPALVAEFAANHQRQRDDVDRLAARAHVLAKGGDEKDEDEQDVAALDPLLLKIFDSEAQGHLASLNRFLDQSADHLPLQAS DELQRALHTLKGSASMAGVLPIAELAGAMDELAREYRAHLIALDLDEVELLLEAEGLLRRGLRQLHSEPLAAIPGAEDLIQRAQALLAERLHAANSAPDK ALRTKRDPQLINNFLAQGMDILLDAESLLQRWQQHPGEGQELSALLDELTTLGEGAHLADLHPVDELCEALLDLYGAVEESSLAVSDEFFQEAQRAHEAL IDMLDELAAGQHVHPQPERVQALRRLLQESLDPSATGLIRSDGSRTLSIRELGHATAEMERDAPVDTSMEDDLAAIFLEEAQDILESAAQALQRWLADPD NGAPLSSLQRDLHTLKGGARMADIRPVSDLAQELENLYEGLVDRRYSYSEELAQLLASSHERLDLLLGQLQQGQPLGDPVALIDAIRRFRQDKPNAIETS AAAQADGAGHDPELLEIFLEEGFDILDSSGAALLRWQEEPSNRQAVETLLRDLHTLKGGARMVEIGPIGDLAHELENLYEGLSAGLLQPSPALFTLLQSS HDRLAQMLDAVRAGHPCPLADRLIAQIQAVNHPQENAAPQAVSAPEPVPTPIVSPPAAPARPDPSAAGDGADMVKVSAELLDDLVNLAGETSIFRGRIEQ QVNDGRVALGEMETTIERMRDQLRRLDTETQGRILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLELKETLDRSNHDAEVLLQQQGRIN TELQEGLMRTRMVPFERMLPRLKRIVRQVAQELGKDVEFLVGNADGEMDRNVLERMAAPLEHMLRNAVDHGLEPADVRIAAGKPARGRISLDLSREGGDI IFDIRDDGAGVPLEAVRNKAIKRGLLAPDSDISERDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMVIDSTPGQGVNFRIRLPFTVAVNR ALMVHCHEDQYAIPLNTIESIVRVLPAELDGYYQLDPPTYTYAGQRYELCYLGELLKTGARPKLLGQSQPLPVLLVQCNERHVAVQVDATAGTREIVVKS LGPQFSAVQGLSGATILGDGRVVLILDLLAPIRALPHQVPRRQVPVEGEGESQRPLLVLVVDDSVTVRKVTSRLLERHGMHVLTAKDGVDAMALLAEHAP DLMLLDIEMPRMDGFEVATQVRNDPRLAHLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLDSIAYWSKTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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