Pseudomonas sp. URIL14HWK12:I7, H032_RS0123060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAACGGCGAAACCAGTCGTGCACCATGGAGTGCCGACGAATTGGCGCGCTTTACTCGCCTGGTGCAGGACGCCGTCGGTTTCGACGCCAGCCGCGGCGAC AGCGTCAGCGTGATCAACGTACCGTTCTCCCTGGAACGCGGTGAAGTGGTCGCCGATATTCCGTTTTATTCGCAACCCTGGTTCTGGGATGTGGTCAAGC AAGTACTGGGTGTGCTGTTTATCCTGGTGCTGGTGTTTGGCGTGCTGCGTCCGGTGCTCAACAACATCACCGGTGGCGGCAAGAGCAAGCAGTTGGCAGG TTTTGGTGATGTCGAGCTGGGAGGCATGGGCGGCCTGGATGGCGAATTGGCCAACGATCGCGTCAGCCTCGGCGGGCCGCAGAGCATTCTGCTGCCAAGC CCGAGTGAAGGCTATGACGCTCAGTTGAACGCCATCAAGAGTCTGGTGGCAGAAGATCCGGGTCGTGTGGCCCAGGTCGTGAAAGAGTGGATTAACGCAG
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| DNA Sequence for Gene |
>H032_RS0123060
ATGAGTGATAATCGAGCCGCTGTTGCCAAATTGTCCCGGGTCGACAAAGCCGCGATCCTGCTGCTGTCCCTGGGTTCGACCGACGCTGCCCAGGTGCTGC GCCACATGGGGCCCAAGGAGGTCCAGCGTGTGGGCGTGGCCATGGCACAAATGGGCAACGTGCACCGTGAGCAGGTCGAGCAGGTGATGAGTGAGTTCGT CGACATAGTCGGCGATCAGACCAGCCTGGGCGTCGGTTCCGACGACTATGTGCGCAAGATGCTCACCCAGGCACTGGGCGAGGACAAGGCCAACGGCCTG ATCGACCGGATCCTGTTGGGCGGCAACACCAGCGGCCTGGACAGCCTCAAGTGGATGGAGCCGCGGGCGGTTGCCGACGTGATCCGTTACGAGCACCCGC AGATCCAGGCGATCGTGGTGGCTTACCTCGATCCGGACCAGGCCGGTGAAGTGCTGGGCAACTTCGACCACAAGGTGCGCCTGGACATCATCCTGCGGGT GTCTTCGCTCAACACCGTGCAGCCGGCGGCCCTGAAAGAATTGAACCAGATTCTCGAGAAGCAGTTCTCGGGCAACTCCAATGCCTCGCGCACCACCCTG GGTGGCATCAAGCGCGCGGCGGACATCATGAACTTCCTCGACAGTTCGATCGAAGGTCAGTTGATGGACTCGATCCGCGAGTTCGACGAAGACCTGTCCG GTCAGATCGAAGACCTCATGTTCGTGTTCAACAACCTGTCCGATGTCGACGATCGTGGCATCCAGGCGCTGTTGCGCGAAGTGTCGTCCGACGTGCTGGT ACTGGCCCTCAAGGGGTCGGACGAAGGCGTCAAGGAAAAGATCTTCAAGAACATGTCCAAACGGGCGGCCGAACTGTTGCGCGACGATCTCGAGGCCAAG GGCCCGGTACGCGTCAGCGACGTGGAAACCGCACAGAAGGAAATCCTCACCATCGCCCGCCGCATGGCCGAAGCCGGGGAGATCGTTCTCGGTGGCAAGG GCGGCGAAGAGATGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCGTTATGTCTGCCAAGAGTGATGAAGCACCCAGCGACCTGATCCGCGCCCGTGACGTCGGTGGTTTCGACGTCTGGTCGCTGCCCAGCTTCGACCCC CATGTTCCCGAGCCTGAGCCGGAACCGGTGGAAGAGCTGCCGGAACCGGAGGAAGTGCCGCTGGAGGAAGTCCAGCCACTGACCCTCGAGGAGGTCGAGA GCATTCGCCAGGAAGCCTACAACGAAGGCTTTGCCGTGGGTGAAAAGGAAGGCTTCCACAGCACCTCGCTCAAGGTCCGCCAGGAAGCCGATGTGGCGCT GACGGCCAAGCTCCGTGCCTTGGAATCGCTGATGCTCAACCTGTTCGACCCTATCGCCGAGCAGGACAGCCAGATCGAGAAATCCCTGGTGGGGCTGGTG CAGCACATCGCCCGGCAAGTGATCCAGCGCGAACTGGCCATCGATTCGACCCAGATCGAACATGTCATGCGCGAAGCGCTCAAGTTGTTGCCATTGGGCG
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| Amino Acid Sequence |
>flagellar motor switch protein FliG
MSDNRAAVAKLSRVDKAAILLLSLGSTDAAQVLRHMGPKEVQRVGVAMAQMGNVHREQVEQVMSEFVDIVGDQTSLGVGSDDYVRKMLTQALGEDKANGL IDRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLGNFDHKVRLDIILRVSSLNTVQPAALKELNQILEKQFSGNSNASRTTL GGIKRAADIMNFLDSSIEGQLMDSIREFDEDLSGQIEDLMFVFNNLSDVDDRGIQALLREVSSDVLVLALKGSDEGVKEKIFKNMSKRAAELLRDDLEAK GPVRVSDVETAQKEILTIARRMAEAGEIVLGGKGGEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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