Pseudomonas sp. URIL14HWK12:I7, H032_RS0106940
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00013.13_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACAACCCCAATATCAAATTCCTGTTCATCTACATCGTGCTGTTCATCACGGTACTGCTGGTGCTCTATATCAAGCATCGCCTGACCCGCATGCCAGTCG GGCGTGCCTGGGAAGCCCTGCGCGAGGATGAAATCGCCTGCCGCTCCATGGGCCTGAACCATGTGCTGGTCAAGCTCTCGGCCTTCACCATTGGCGCCTC CACGGCGGGCCTGGCAGGGGTGTTCTTTGCCAGTTACCAGGGCTTCGTCAACCCGTCTTCGTTCACCTTCTTCGAGTCGGCGCTGATCCTGGCCATCGTG GTGCTGGGCGGCATGGGCTCGACGGTCGGCGTGGTGATTGCCGCCTTCGTACTCACTGTGGCGCCGGAGCTGCTGCGCAGTTTCTCCGAATACCGGGTGC TGCTGTTCGGCGTATTGATGGTGTTGATGATGATCTGGCGTCCGCGCGGCCTGATCCGTATCAGCCGTACCGGGGTGACGCCGCGCAAGGGGGTAGCGCC
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| DNA Sequence for Gene |
>H032_RS0106940
ATGAGCGAAGTCGTACTCAAAGTTGAAAACCTGATGATGCAGTTCGGTGGCATCAGGGCCCTCAGCGACGTCAGCCTGCAAGTCAAACGCAACTCGATCT TTGCCCTGATCGGCCCCAATGGTGCGGGCAAGACCACGGTGTTCAACTGCCTGACCGGTTTCTACAAGGCCACGGGCGGGAAGATCGAACTCAACGTGCG TGGCGAGCAAACCAACGTCATCAAGCTGTTGGGCGAGGCGTTTCGCCCGACTGATTTCGTGTCGCCGAAGTCCTTCGCCAGCCGGCTGTACTACAAGATG TTTGGCGGCACCCACCTGGTGAACCGCGCCGGCCTGGCGCGCACCTTCCAGAACATTCGCCTGTTCAAGGAAATGTCGGTGCTGGAAAACCTGTTGGTGG CCCAGCACATGTGGGTCAACCGCAGCATGGTGGCGGGTATCCTCAACACCAAGGGCTACCGCAAGGCCGAAAGCGACGCCCTGGACCATGCCTTCTACTG GCTGGAAGTGGTGGACCTGGTGGATTGCGCCAACCGCCTGGCGGGCGAGCTTTCCTACGGTCAGCAACGCCGCCTGGAAATCGCCCGGGCCATGTGCACG CGCCCGCAGATCATCTGTCTCGACGAACCGGCCGCCGGCCTCAACCCTCAGGAAACCGAAGCGCTGAGCGCGATGATCCGGCTGCTGCGCGACGAGCATG ATCTGACCGTGGTGCTGATCGAACACGACATGGGCATGGTAATGAGCATTTCCGACCACATCGTGGTGCTGGACCACGGCAACGTGATCGCCGAGGGCGG TCCGGAGGCGATTCGCAACGATCCGAAGGTGATCGCGGCCTACCTGGGTGCCGATGAAGAGGAACTGGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGGACCTATCCTCGAGCTCAAGGAGCTGGACGTGTTCTACGGGCCGATCCAGGCCCTGAAAAAAGTCTCGATGCACATTGGCGAAGGTGAAACCGTGAG CCTGATCGGCTCCAACGGTGCCGGCAAGTCCACGTTGCTCATGTCGATCTTCGGCCAGCCGCGTGCAGCAGGCGGGCAGATCATCTACCAGGGTGTGGAC ATCACCCACAAGTCGTCCCATTACATCGCCTCCCATGGCATCGCGCAGTCGCCGGAAGGGCGGCGGGTATTCCCGGACATGACCGTCGAGGAAAACCTGC TGATGGGCACCATCCCCATCGGTGACAAGCACGCCAGTGAAGACATGCAGCGCATGTTCGAGCTGTTTCCACGGCTCAAGGAGCGCCGCAACCAGCGGGC CATGACCATGTCCGGCGGCGAGCAGCAGATGCTCGCCATTGCCCGGGCATTGATGAGCCGGCCAAAGTTGTTGCTGCTCGATGAGCCGAGCCTGGGGCTG
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| Amino Acid Sequence |
>amino acid ABC transporter ATP-binding protein
MSEVVLKVENLMMQFGGIRALSDVSLQVKRNSIFALIGPNGAGKTTVFNCLTGFYKATGGKIELNVRGEQTNVIKLLGEAFRPTDFVSPKSFASRLYYKM FGGTHLVNRAGLARTFQNIRLFKEMSVLENLLVAQHMWVNRSMVAGILNTKGYRKAESDALDHAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMCT RPQIICLDEPAAGLNPQETEALSAMIRLLRDEHDLTVVLIEHDMGMVMSISDHIVVLDHGNVIAEGGPEAIRNDPKVIAAYLGADEEELV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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