Pseudomonas sp. URIL14HWK12:I7, H032_RS0103705
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTCGAATGGACCGGCGACGGCTTGCGTTGCCAACCTGAACTGGCTGAACGGCTGGCGTTTTTTGAAGCGATCGAGGCTTGGCTGAGCGGACACCGGCAA CCGTTCCAGGTCATTGAAGGCGATTGGGCGCAACGCCAACAGCAAGTGTTCGCCGTCGTTAGCCAGCTGCTTCAAGCCTGATCGCGGGGTGATCTGTTCC ATTCTTGAAACAGCGCAGTCGCTCCAAACCCGGATCCAACGCCGCTTCACCAAATTGCCATCAAGACTGTCAAGCTTCTGAAACACCCGCCCAAAAGCCT GGATCCAGAGGCCTGGGACGGTAGGTGACCGGTTGGTCACCATGCACCTTGTCTCAGCGCTGAAACAGGTTCCTTCCCCGGCATGCCCTCCGTAGCTCCA ACTCGTTGAAATAAAAAACATTTCAAAATACGGCACGACACCTGCTCTCCACCTTCGCAACGCTGACTAGGGCCAGCGTACCGAAGAAGGAATCAATGCC
|
|
| DNA Sequence for Gene |
>H032_RS0103705
ATGGGGATTTTCGATAGGGGCATAACCTGTCTGCTGTTGATCGGCTGCGCCGCCAGCGCAACGCTCAGTCTGCCGGCACAGGCCGAGGGCAACGGCGTCA TTGTCCTCAACCGTGACGTGCAGCCCATCGCAATTGGTCGCAACGGTGGCAAAGACCCCTACCCGACCACCGTCAATGCCAACCCCTCCGAACGAATCCA CCAGGCGACCGCCAGCACCGAACTGAGCGATGGCGAATTTGCCAGCGTGGCCAGCGGCTCGTCGATCCGCAACACCGTCAACCCGAATACCGGCGTGCAA GGCTTGAACGTCGTGACCAACCCCAACGGCATGCCGGGCATGAGTGCCGGTCACGGTGGCGGTAGCGGCGGCGCGATCTCCGGCACCATCAATCGCTCGT TGAGTTCAGGCCTGGCCCCGCTGGGTCGGCTGGCGGGAGGCCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GATGAAGCCAACCTTGTTTCTCCTCGCCCTGTTCATGCTTTCCCTGCTCAGCTCTTTCAACGTATTTGCCGATTCGGGTGCTGCAGCGGTCAGCAGCGCC AACCTGCAGGATTCCGGCAGCCATTACACCGGCAACTTCAACGTCAACCAGGCGGCCGGTGACCAGACCCAGCAGACCAACACCCGGGCGATCGCCATCG GCAGCCACGCCCAGGCCAGCACGAGCGTGCAGCAACGCGTCGACACGCCGGCCAACCCCTCCATGAATGCCACCGCTCGAATCGGCGGCCACTCCTTTAC CAACGGCAACGGTGTGCTGGGCGTCAACCAGTCCGCCGGGGCCAACAACCAGATGGCCAATGTCATGCGGGTGGGCATCAGTGCCCATCCGCAGAGCATT GATGACAGCGCCCTATCTCAACAGAACGTGGCGTTGCTACCGAACTCAGGAGCAACTGGCGCCCCAACCGGCAGTCGCCAGGTCGTTACCAGCGACCAGG
|
|
| Amino Acid Sequence |
>hypothetical protein
MGIFDRGITCLLLIGCAASATLSLPAQAEGNGVIVLNRDVQPIAIGRNGGKDPYPTTVNANPSERIHQATASTELSDGEFASVASGSSIRNTVNPNTGVQ GLNVVTNPNGMPGMSAGHGGGSGGAISGTINRSLSSGLAPLGRLAGGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|