Pseudomonas sp. LAIL14HWK12:I6, D907_RS0121060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00013.13_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGCCAGCGCGCTCAATAGCCCGACGACGCCCAATGCTGCCCTGAACATGAATAATCTCCTGCTTGCCTGATCGTCAAAGGCGCAGCTTGGCCGACACG GGCGTAGATTTCCACCCCGGCTGTTGACCTTGCCCCGATGGCAAGCTTGAGACTCGTTGAAAACCTGAAGGAGAGACCCCCATGCAAGTGTTCAATGTAC AAGGCATGACCTGTGGCCATTGTGTGAAAGCGGTGACCCGGGCAGTGCAGGAGCAGGATGCAGCGGCCAAAATCGAGATCGACCTGGCGGCCAGACAGGT GCGGGTGCAGAGTGAGCTGGCGCCGGAACAGATTCTTACTGCGATCAGGGATGAAGGGTATCAGGCTGAACTCGCCTGATTACCAACCTGTGGAAGCGGG CGTGCCCGCGAAGCCCGTGGGTTTGTTGCAAATGTTTTCACATTCATAGGGTCCACAGCAGGTAGAATCATCCACTTGCTTAGCCTGCTATGGATTCCTG
|
|
| DNA Sequence for Gene |
>D907_RS0121060
ATGAACCTGCGAATGGTGCTCATCCTGGGCGCACTCAGTGCGTTCGGGCCCTTGGCGATCGACTTTTACCTGCCCGCCTTCCCGGCCATGGCGCAGGCGT TCGCCACCGACGAAAAACACGTCCAGGCCACCTTGGCCGCTTACTTCCTTGGCCTGTCCATCGGCCAGCTGGCTTACGGGCCGGTTGCCGACCGCTTTGG CCGTCGCAAGCCGCTGATGTTCGGCGTGACCCTGTTCACCCTGGCGTCACTGGCCTGTGCCTATGCCCCCAACCTCGACACCCTGGTGGTTGCGCGTTTT GTCCAGGCGCTGGGCGGTTGCGCAGGCATGGTGCTGTCGCGGGCCATCGTCAGCGACAAGTGCGACCCGGTGGCCTCGGCCAAGGTGTTCTCGCAACTGA TGCTGGTCATGGGCCTGGCGCCAATCCTGGCACCGATGCTGGGCGGGGTGTTGGTGAACCTGGCGGGCTGGCAGTCGATCTTCCTGGCGTTGAGCCTGTT CAGCGCCGGTTGCCTGCTGGCGGTCAGCCTGGGCCTGCCGGAAAGCCTGCCTGCGCATATTCCGCGACAGCCGCTGTCTGGCGCATTGCGCCAGTATTTG CGCCTGCTCGCTGACCGGGTGTTCCTTGGCCATGCCTTGACGGGTGGTATCGCCATTGCCGGCATGTTTGCCTACATCGCCGGTTCGCCATTCGTGTTCA TCAAGCTCTATGGCGTACCGGCCGAACATTACGGCTGGCTATTCGGCACCAATGCTGCCGGCTTCATACTCGTGGCGCAGGTGAATGCCCGATTGCTGGC CAAGCGCGGGCCTGCTTTCCTGCTGGCGCGCGCCGTGTGGCTGTACCTGGTTGCGGGCCTGGTGCTGTTGGGCGTGGCGGCTTTGCGACCCGCGCAGCTG TGGCCGCTGCTGGTGCCGTTGTTCATCTGCATTGCCAGCCTGGGCTGCATCATCCCCAATGCTTCGGCGTGTGCCATGAGCGGGCAGGGCGCGCGGGCCG GCAGTGCTTCGGCATTGATGGGGTGCGTGCAGTTCAGCGTTGCTGCGGGTGCCGCTGCGCTGGTCGGGCTACTGCACGATGGCAGCGCGGTACCTATGGC GCTGGTGATCAGCTTGTGCGGGGCATTGGCGGTCAGTGTCGCGCTGCTGACCCGGCGCTTGCAGGCCAAGGCTCCCGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGGGTGAGGTGCATGAAGGCGGGTTTCCAGCGTGGCGACGAAGGCTCGCGCCTCGGCCTCGCTGCGGAAACTGACCACGTGTTGATCGAGCTGGACCTG CCAAGGACAGGCGGGGTTTCGGCTCGATGCACTGACGATAATTTTCATCGCGGCATACCTCCAGAATGGGAAGAGCCGCTCAAGTGTAGCGCTGGCCCTC CTGCCTGCCATGCGTTGCGTCAGTGTTCTGACTGACGGTCGAAGGGCGCAATGCCTGCAAACCTGCGAAACCTTCGCTAGCTCGCGCGCTATTTGTGGAA GGTCGCTGTGGGCCGTATCTGAAATTGCTGCAAGTCTTTTTCTATCCAGATATTTCGGGGCCTCTGTCTGTGGGTATCGGCGCTTTGGCTGACCGGCTTG CGGGTCGCTTTCTGGCGCCGGTTCACTGGTTGCCATGGGTAGGCATACCCAGTGGTTTTTCGTCGCCGATGTGTCTGCGCAAGGCCGTCTGAATGCGATT
|
|
| Amino Acid Sequence |
>major facilitator transporter
MNLRMVLILGALSAFGPLAIDFYLPAFPAMAQAFATDEKHVQATLAAYFLGLSIGQLAYGPVADRFGRRKPLMFGVTLFTLASLACAYAPNLDTLVVARF VQALGGCAGMVLSRAIVSDKCDPVASAKVFSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPESLPAHIPRQPLSGALRQYL RLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHYGWLFGTNAAGFILVAQVNARLLAKRGPAFLLARAVWLYLVAGLVLLGVAALRPAQL WPLLVPLFICIASLGCIIPNASACAMSGQGARAGSASALMGCVQFSVAAGAAALVGLLHDGSAVPMALVISLCGALAVSVALLTRRLQAKAPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|