Pseudomonas sp. LAIL14HWK12:I6, D907_RS0119650
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCAATGCCCACTCGCTGGCCATGGACCTTCACGACCAGCATGCCTACATGGCCAAGACCGGCCAGTGGCGCTTCACACCCCCCACCCACGTGGTCGCG GCCCTGCATGAAGCACTGCAGCAATACAATGAGGAAGGCGGCCTGCCGGCCCGCTACCAGCGCTACGCCAACAACTGCAAGACCCTGCTCGACGGCATGG CGGCCATCGGCCTGCGCAGCTTCCTGCCGGCCGAGATCCAGGCGCCGATCATTGTCACGTTTCATGCACCCAACGATGCCCGCTACCAGTTCAAAGACTT CTACGAGCGGGTCAAGGCCAAGGGTTTCATCCTTTACCCGGGCAAGCTGACCCAGGTCGAAACCTTCCGCGTCGGTTGCATCGGCGTGGTCGGAGCCGAC GGCATGCAAGCCGCCGTGAATGCCGTGGCCCAAGTGCTGCGGGAAATGGAAGTGCTGGACATCTGACCCTTTGCCCACCCGACTTCAGGAATTAGCGCAC
|
|
| DNA Sequence for Gene |
>D907_RS0119650
ATGAACTACAGCAACCCTACCCAGCTGCAAGCCGCCATCCTCGACTGGGCCGGCACCGTGGTCGATTTTGGCTCCTTCGCGCCGACCCAGATCTTCGTCG AGGCGTTCGCCGAATTCGACGTGCAAGTGACCATCGAGGAAGCCCGAGGCCCGATGGGCATGGGCAAATGGGACCACATCCGCACCCTGTGCGACGTACC GGAAATTGCCGAGCGCTACCGCAAGGTGTTCGGCCGCACCCCCACCGACGATGATGTCACCGCCATCTACAACCGCTTCATGCCACTGCAGATCGAGAAG ATCGCCGTGCACTCGGCACTGATCCCCGGTGCCCTGGAAACCTTGACCGGCCTGCGCCAGAACGGCCTGAAGATCGGCTCCTGCTCGGGTTACCCGAAAG TGGTGATGGACAAGGTGGTGGAGCTGGCCGCGCAGAATGGCTACGTGGCCGACCATGTGGTAGCCACCGATGAAACCCCGAACGGTCGCCCCTGGCCAGC CCAGGCCTTGGCCAACGTGATTGCCCTTGGCATCGACGACGTAGCGGCCTGCGTGAAGGTGGATGACACCGTGCCGGGCATTCTCGAAGGCCGACGCGCC GGCATGTGGACCGTGGCCCTGGTGTGTTCGGGCAATGCCCTGGGGCTGACCTGGGAAGGCTACCGTGCACTGAGCGCCGAGAAGCTGGAAAGCGAGCGCA CGCGCATTCACACGCTGTTCGCAGGCTCCCGCCCGCACTACCTGATCGACACCATCAACGAGCTGCCCGAAGTGATCGCCGACATCAACCGGCGCCTGGC CAAGGGCGAGATGCCGCAGGCCTCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGGCAAGTGGGGCCGCTTTGCGGCCCCCGTGCACGGTCTACTGCGGCAACTGCACTTGCGGCTTGGTCGAGGCAAAGATTGCCCAGCTGGACACGAAC AGTGCTGCGATCAATGGCCCGATTACGAAACCGTTGAGCCCAAAGACCGCCAGCCCACCCAACGTCGACACCAGGATCAGATAGTCCGGCATACGCGTGT CCTTGCCCACCAGGATCGGCCGCAGCAGGTTGTCCACCAGGCCGATCACCAGCACCCCGAACGCGGTCAGGATCACCCCCGGCAATATGGCCCCGGTCAG CAGGAAATACGCGGCCACCGGCGCCCAGACGATGCCAGCGCCCACTGCCGGCAGCAGCGACAGGAACGCCATCAGCACCGCCCACACCAACGCACTGGGG ATATCCAGCACCCAGAAGATGAACCCGCCCAGCGCCCCTTGGGTAATGGCCACCAGCACGTTACCTTTCACCGTCGCCCGCACCACCCGGTTGAATTTCA
|
|
| Amino Acid Sequence |
>phosphonoacetaldehyde hydrolase
MNYSNPTQLQAAILDWAGTVVDFGSFAPTQIFVEAFAEFDVQVTIEEARGPMGMGKWDHIRTLCDVPEIAERYRKVFGRTPTDDDVTAIYNRFMPLQIEK IAVHSALIPGALETLTGLRQNGLKIGSCSGYPKVVMDKVVELAAQNGYVADHVVATDETPNGRPWPAQALANVIALGIDDVAACVKVDDTVPGILEGRRA GMWTVALVCSGNALGLTWEGYRALSAEKLESERTRIHTLFAGSRPHYLIDTINELPEVIADINRRLAKGEMPQAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|