Pseudomonas sp. LAIL14HWK12:I6, D907_RS0111720
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCAACCCGACCATCCCCGCCTGGTTCGATGACCTGCATGACGCAGGCATCCCCGCTGAATGGACCGTGGACATCCTCACCCGCCTGTGGCGCAAACTG GCGCTCAACTGTGCCATCAACCCGCTGACCGTGCTATACGACTGCCAGAACGGTGGGCTGCTGGGGCACCTGGGCGAAGTTGACGCGTTGTGTACCGAAC TGGCCGAATTGCTGCGCCGCTGCGGCCAACCGCAAGCAGCAGTCGAGCTGGATGAAGAAGTGCAACGGGTGATCCTCGCCACCGCAGCCAACTACTCTTC CATGTACCAGGACGTACGCGCCGGCCGACGCACCGAGGTGCATTACCTGCTCGGCCATGCCTGCCGCGCAGCCGGGCGCCATGGCCTGCAATTGCCGCAG CTTGAACACTTGCGGCAGCGCCTGGTCGATAACTTGCGCACACGTGGCTTGCCCTGCGACTGATGCGGCCCTTCAACCGGATACGGACATTGCCTAGCCC
|
|
| DNA Sequence for Gene |
>D907_RS0111720
ATGACCTTGCGCCAACGCCTGGAAAACCTCCCGGTCGGGCAGAAGCTGCTGGCGGCCCTGCTGGTATTGCTGGTGACCATCCTGCTGGTGGCCAACCTCA CCTTCATCAGTGCCGCCTACTGGATCACCCAGGAGAGCATGGCCCCGCAGGCGCTGCAGACTATCGGGCGGCTGGTGGCCAACCCGCAGCTTGCCGCCCG CGCGGGTGACACCGCAGAAACCGCCAACGCCCTGCTCAAGGAGCTGGACAGCTACACGCCATTGCGTGCGGCCGCCGTCTACGGTGGCGATGGCCGCATG CTGGCGCAATTGCAGCATGGCGATCCGCTAACCCTGCCCAAGCGCTTTCGCAACATCGACGGCTGGCGCCTGATGGAGTTTCGCAGCACCCAGCTGATCC GCATCCCGCGCGACGCCAACCCGCCGGCGCACCTGCTGCTGGTGGCCAGCAGCGAGCTGCCCACCGCCTTCTACACCGGCACCCTCAGCGCCAGCCTGGG CATTCTGGTGTTCAGTATCCTGCTGTGGATCGTCATCGCCCGGCAGATAAAACGCCTGATCACCCAGCCGATCAACCAGCTTGAAGAGCTCAGCCGCCAG GTCACCCGCGAAGAAAGCTACGCCCTGCGCGCCCGGCGCGGCAACGACGATGAAATCGGCAGCCTGGCTGATGCCTTCAACACCATGCTGTCACGCATCG AAGCCCGCGAGCAGCAGCTCAAGCGCGCCCGCGACGAGTTCCAGGATGCCTATGACCAGGCCCAGGGCCTGGCCGAGGAAACCCGCCACACCAACCGCAA GCTGGAGCTGGAAGTACAGGTACGCAGCAAGATCGAGAAAAAGCTCACGGGTTTCCAGAACTACCTCAACAGCATCATCGACTCGATGCCCTCGGCGCTG ATCGCCCTTGACGAACAGCTTTACGTGACCCAGTGGAACCACGAAGCCACGGTACTCTCCGGCACACCACTGGACGAAGCGCTGAACCAACCGGTATTCA TCGCTTTCGAGCCGCTCAAGCCATTCCTTCCGCAACTGAAGGAAACGGTCGAGAAGCACCGGGTGGCAAAGATCGAGCGGGTCACCTGGCCCAAGGGCGA CGACCTTCGCCACTACGCCCTGACCTTCTACCCGCTGACCGGCGGCGGCGGGCGCGGCGTGGTGATCCGCATCGACGACATCACCCAGCGGCTGTCGCTG GAGGAGATGATGGTGCAGTCGGAGAAAATGCTTTCAGTCGGTGGCCTGGCTGCCGGCATGGCCCACGAAATCAACAACCCGCTGGGTGCCATCCTGCACA ACGTGCAGAACATCCGCCGGCGCCTGTCACCAGAGCTGCCGCGCAACCAGGAACAGGCCGAAGAGCTGGGTATCGACCTGTCAACGGTCAACCGTTACCT GGCCAGCCGCGAAGTGCCGCAATTGCTGGACGGTATTCAGCAGGCCGGCGCGCGGGCTGCCAAGATCGTCACGCACATGCTCAGTTTCAGCCGCCGCAGC AACCGCCAGCTGGTGCCGTGCGAGCTGCCGGCCCTGATCGACCAGGCGGTGGAAATTGCCAGCAACGACTTCGACCTCACCATCGGTTTCGACTTCAAGG GCCAGGCCATCGTGCGCCAGTTCGACCCCACACTCGGCCCGGTGCCCTGCACGGCCAACGAACTGGAGCAGGTACTGCTCAACCTGCTGAAAAACGCGGC CCAGGCCATCCACCTGCGCCCTCAGCCGAGTGAACCCGGGCGTATAACCCTGCGCACGCGGCTGAACCCGCCCTGGGCGGAGATTCAGGTCGAGGACAAC GGCATCGGCATGCCCGAAGCAGTGCGCAAGCGCACCTTCGAGCCGTTTTTCACCACCAAGGAAATTGGGCAGGGCACCGGGTTGGGCCTGTCGGTCTCGT ACTTCATCATCACCAATAACCACAAGGGGCAGATGGAAGTGCAGTCCACGCCCGGCCAGGGCACCTGCTTTACCCTGCGCCTGCCCCTCGGCCAGCCGGC GGCGCCGGCCAATACGGAGAAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CATGGGCTACCGCCTGTCGAAGATCTACACCCGCACCGGCGACAAGGGCGAAACCGGCCTGGGCGACGGTCGCCGGGTACCCAAGGACCACCCGCGGATC GAGGCGATTGGCGAGGTGGACAGCCTGAACAGCCAGTTGGGCGTGCTACTGGCGGGGTTGGCCGAGCAAGGGCTGGATGAGGTGAGTGCCGTGCTCGCGC CGTGTCAGCACCGCCTGTTCGACCTTGGGGGGGAGCTGGCAATGCCGAGTTACCAGGCGCTGAACCTGGCGGAGGTTGAGCGGCTGGAGGCGGCTATCGA TGTGTGGAATGAAGAGCTGGGGCCGTTGAAGAACTTCATACTGCCCAGTGGTTCGGCGCTGGTGGCACAGGCGCATGTGTGCCGCTGTTTGGCGCGTAGC GCTGAACGGCGCTGTCAGCAGTTGAATGCAGTTGAGCCGTTGGAGGGGGTTGGGCTGGCGTATATCAACCGGCTTTCGGATCTGCTGTTTGTGGCGGCGC
|
|
| Amino Acid Sequence |
>histidine kinase
MTLRQRLENLPVGQKLLAALLVLLVTILLVANLTFISAAYWITQESMAPQALQTIGRLVANPQLAARAGDTAETANALLKELDSYTPLRAAAVYGGDGRM LAQLQHGDPLTLPKRFRNIDGWRLMEFRSTQLIRIPRDANPPAHLLLVASSELPTAFYTGTLSASLGILVFSILLWIVIARQIKRLITQPINQLEELSRQ VTREESYALRARRGNDDEIGSLADAFNTMLSRIEAREQQLKRARDEFQDAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNHEATVLSGTPLDEALNQPVFIAFEPLKPFLPQLKETVEKHRVAKIERVTWPKGDDLRHYALTFYPLTGGGGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPRNQEQAEELGIDLSTVNRYLASREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQLVPCELPALIDQAVEIASNDFDLTIGFDFKGQAIVRQFDPTLGPVPCTANELEQVLLNLLKNAAQAIHLRPQPSEPGRITLRTRLNPPWAEIQVEDN GIGMPEAVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSTPGQGTCFTLRLPLGQPAAPANTEK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|