Pseudomonas sp. LAIL14HWK12:I6, D907_RS0111090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTTGGCTACACGGTGATGCCCTGTTCAGCGGCTTGTACCTCAACGAGCTGCTCATGCGCCTGCTGCCGGCTGAAGCGCCGTTCCCGGCCCTGTTCGAG CATTACACATTGACCCTGCAAGCCTTGGCCGCCGGGCGCCCGCTGGAGCCGCTGCTGCGTTCGTTCGAATGGCGGCTGCTGGACGAACTCGGTTATGCGT TTTCCTTGAACCATGACGTCAACGACCACTCCATCGTGGCCGACGGCCTTTACCGTTTGCGCGTGGATGCCGGTCTGGAGCGGGTCGAGCTGGTGCAACC CGGCCTGTTCCGCGGCACCGAGCTCATTGCCTTGGCCGAAGCCGATTGGAACGCCCCAGGCGCCTTGCTCGCCGCCAAGCGCCTGATGCGCCAGGCATTG GCCGTTCACCTGGGCGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCACGACGTATGCTGTGGGGCTCAATCTTCAGGAGAGCCTTTC
|
|
| DNA Sequence for Gene |
>D907_RS0111090
GTGACTCACAGCAACCGCATGCTTCTTGGCGTAAACATCGACCACGTGGCGACCCTGCGCCAGGCCCGGGGCACGCGTTACCCTGATCCGGTCAAGGCTG CTCTGGACGCCGAAGAGGCGGGTGCCGATGGCATTACCGTGCACCTGCGCGAAGACCGCCGGCACATCCAGGAGCGTGACGTGGTGCTGCTCAAGGATGT GCTGCAGACGCGCATGAACTTCGAGATGGGCGTCACCGAAGAGATGATGGCCTTTGCCGAGAAGATCCGCCCTGCGCACATTTGCCTGGTCCCCGAAACC CGTCAGGAGTTGACCACCGAAGGTGGCCTGGATGTGGCGGGACAAGAGGCGCGAATCAAGGCCGCCGTGGAGCGCCTGTCGCGCACCGGTGCCGAGGTGT CGTTGTTCATCGATGCTGACGAGCGGCAGATCGAGGCGTCACGTCGCGTAGGCGCGCCGGCCGTCGAGCTGCACACCGGGCGTTACGCCGATGCCGAAAC CCCGGCTGAAGTGGCTGAGGAACTCAAGCGTATTGTCGATGGCGTGGCCTTTGGCGTGGGGCAGGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTAC CACAACGTTGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGCTGAACATTGGCCATGCGCTGGTGGCGCATGCGCTGTTCGTTGGCTTCAAGGCCGCAG TGGCCGAGATGAAGGCGCTGATCGTGGCGGCTTCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTTGATGGTCGCTTGTACCGGCCTCTTCGCGGGCTTGCTCGCGAAGAGGCCGGTACAAGCAGCCGATTACTCGGCAGGAAACACCAGGGTAAAGCGGGTA GGCCCAAGGGGGCTGCTGTTCACTTCGACCCGCCCACCATGCAACTGCATGATCGACTTCACGATCGCCAACCCCAACCCGGTCCCGCCCTCCAGACGCG AGCGCCCCGAGCCCACCCGGTAAAACCGCTCGAACAAGCGCGACTGGTGCTCGGCAGCAATGCCGGGGCCCTGGTTCTCCACAGATAGCCGTACTTCGTT GCCATACCGTTCGATACGCAGTTCGATGGGCTCACCCTCAGGGCCATGCCGTATCGCATTGCTTAGCAGGTTCGACAACGCCCGCTGGAACATCAACCGG TCACCCAGCGCCGTGCCCCACCCCTGAACACGCAATTCAACGGCTTTCACCTCGGCGCTGAAAGCAAACAGCTCGGCCACCCTTGCAGCCTCGTCGGCCA
|
|
| Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTHSNRMLLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVVLLKDVLQTRMNFEMGVTEEMMAFAEKIRPAHICLVPET RQELTTEGGLDVAGQEARIKAAVERLSRTGAEVSLFIDADERQIEASRRVGAPAVELHTGRYADAETPAEVAEELKRIVDGVAFGVGQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKAAVAEMKALIVAASR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|