Pseudomonas sp. LAIL14HWK12:I6, D907_RS0110965
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGTGCTCGGTCGCAGCGAAGCGGAAGCGACCAAGAAGGGCCTGGCCCTGCTCGACCGCGTCGGCCTCGGTGCCCACGCCAAGAAGCACCCCGGCCAG CTTTCCGGTGGCCAGCAGCAGCGTGTGGCCATCGCCCGCGCCCTGTCGATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCGCTGGACCCGG AAATGGTCAATGAAGTACTGGACGTCATGGTCGAGCTGGCCCACGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCTTCGCCCGCAAAGTGGC CAACCGCGTCATCTTCATGGACAAGGGCAACATCATCGAGGACTGCCAGAAGGAAGACTTCTTCGGCAACCCGTCGGCCCGCCACGAGCGTACCCAGCAC TTCCTCAGCAAGATCCTGCAACACTGATTTTGCTTCACAGAACCGGTCGGCGCCGCTGCCCTTTCGGGCAGTTGGCGCTGGTCGTGACAAGGCCACTGTG
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| DNA Sequence for Gene |
>D907_RS0110965
ATGAAATGCGACCCTTCGCTTCTTCTCCCTGCCAAGCCTGCCGTGAATTCCCGCCTGCTCCGCCAATTGCTGTTGCCGCCCCTGATCATCCTGCTGATGG TCGGCCTGGGAATGGCTGGCTACCTGATCAGCGAAAGCAACGGCATTCGCACCCTCAGCGAAAACGGTGAGCGCCAGCTGGAGCTGCACGCGCGCACGGT CGAAAGCGAAATCAGCAAGTACACCTATCTGCCGAGCCTGCTGGAGCTGGAAGACAGCGTCTCGCACCTGCTCACCGACCCGGACGGCGGCTCACGGCAA ACGGTAAACGAATACCTTGAGGGCCTGAACCGGCGCAGCCGCAGCCGGGCCATCTTCGTTCTCGATACCAATGGCCGGGTACAGGCCACCAGCAACTGGC GCGACGCCGACTCGTTCCTGGGTGAAGACCTGTCGTTCCGCGCCTACTTCCAGACAGCCGTGCGCGGTGAGCCTGGGCGTTTCTATGGCATCGGCAGCAC CACCGGCGAGGCTGGCTACTACCTGGCTCATGGCCTGGAGGAGCACGGCAAGATCATCGGCGTGGCCGTGATCAAGGTGCGCCTGGACACGCTCGAGGAG CGCTGGCAACGTGCCCGTCTGGAGGCGTTCGTCAGTGACGAGAACGGCATCATCATCCTTTCCAGCGACCCGGCCCGACGCCTGAAATCGGTGCGCCCGC TGACCCCGCAAATCAAGGAGCGCCTGGCGCGCAGCCTGCAATACTACTGGTGGCCGCTGAACGAGTTGCAGCCACTGGCCCGGGAAACCCTGGCCGATGG CGTGGAAAAACTGACCTTCCCGGCCAACAGCGAAACCGCAAAAGGCAAACCCCACGAGGTTGCCTACCTGGCGCAGACCCGTCGCCTGGTGGATACACCC TGGCATTTCACCCTGCTGACCCCGCTGCAGGACCTGCGCCGCGAGTCCATGGTGCAGGGCATCCTGGTGGGCGTGGCGTTCGCCTTGCTGGCGATCCTCG GCATCGCCTGGAACGAGCGACGCAAGGTCATCGCCACCCGCCTGGCAGCCCGTGAAGCCCTTGAGGAAGCGAATAGCCAGCTGGAGCGGCGGATTGCCGA GCGCACCGCCGACCTGCGTGCCAGCAACGAACGCCTGAAGGGGCAAATTCGCGAGCGCCGGCATGCCGAGCAAACCTTGCGCCACGCCCAGGATGAGTTG GTGCAGGCCGGTAAGCTGGCGGCCATCGGGCAAATGTCCACCAGTATCGCCCATGAGCTGAACCAGCCGCTGGCCGCGTTGCGCACCTTGTCTGGCAACA CGGTGCGTTTCCTCGAACGTGGGGCACTGGAAACCGCCAGCACCAACCTGCGCACCATGAACGACCTGATTGACCGCATGGGCCGCATCACCGCCAGCCT GCGCTCCTTCGCCCGGCGCGGCGATGACAGCGGCCAGGCCTCGCTGGCCAAGGCGGTGGAGGCGACCTTGCAAGTATTGGCCAACCGCATCAGCGCCTGC CATTTGCAGTTGCACCACCAGTTCGACGACCAGCAGCTGGCTATCGACCAGACGCGCCTCGAACAGATTCTGGTCAACCTGATCGGCAACGCGCTTGATG CCATGGCCGCGCAACCGCTGCCCGAGCTATGGCTGGAAGGCGAACTGCAGGGCGACAAGTACCGCTTGCAGGTGCGCGACAATGGCCACGGCATCGATGC CGAGGCGCGCAAGCACCTGTTCGAACCTTTCTTCACCACCAAACCGGGCGAACATGGCCTGGGCCTGGGCCTGACCTTGTCGGCGAGCCTTGCCGCCGCC GCCAAGGGCAGCCTCAACGTCGAGCACCCCGCCACTGGCGGCACGGCCTTCGTCCTGGCCTTGCCCCTGGTTTCTCCCCCTAGCGAATCGGCAGAGCACC CATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCAAGCGCCTCTTACCGTACTGATCGTCGAAGACGACCCGCATGTGCTGCTCGGCTGCCAGCAGGCGCTGGCGCTGGAAGATATCGCCTGCGAAGGCGT GGGCAGCGCCGAACAGGCGCTGGAACGCATCGGCGACGATTTCGCCGGCATTGTCGTCAGTGACATCCGCCTGCCGGGCATTGACGGCCTGGAACTGCTC AACCGCCTGAAGGCCCGTGATCGCAGCCTGCCGGTGGTGCTGATCACCGGCCATGGCGATATCGACATGGCCGTCGGCGCCATGCGTAACGGCGCCTACG ACTTCATGGAAAAACCGTTCTCCCCCGAGCGCCTGGTCGATGTGGTGCGCCGCGCACTGGAGCAACGCGGGCTGTCGCGAGAAGTGGTGGCCCTACGGCG CCAACTGGCCGGACAGAGCAGCCTTGAGGGCCGCATCATTGGCCGTTCCCCCGCCATGGAGCACTTGCGCGAACTGATCGCCAACGTCGCCGATACCTCA
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| Amino Acid Sequence |
>histidine kinase
MKCDPSLLLPAKPAVNSRLLRQLLLPPLIILLMVGLGMAGYLISESNGIRTLSENGERQLELHARTVESEISKYTYLPSLLELEDSVSHLLTDPDGGSRQ TVNEYLEGLNRRSRSRAIFVLDTNGRVQATSNWRDADSFLGEDLSFRAYFQTAVRGEPGRFYGIGSTTGEAGYYLAHGLEEHGKIIGVAVIKVRLDTLEE RWQRARLEAFVSDENGIIILSSDPARRLKSVRPLTPQIKERLARSLQYYWWPLNELQPLARETLADGVEKLTFPANSETAKGKPHEVAYLAQTRRLVDTP WHFTLLTPLQDLRRESMVQGILVGVAFALLAILGIAWNERRKVIATRLAAREALEEANSQLERRIAERTADLRASNERLKGQIRERRHAEQTLRHAQDEL VQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALETASTNLRTMNDLIDRMGRITASLRSFARRGDDSGQASLAKAVEATLQVLANRISAC HLQLHHQFDDQQLAIDQTRLEQILVNLIGNALDAMAAQPLPELWLEGELQGDKYRLQVRDNGHGIDAEARKHLFEPFFTTKPGEHGLGLGLTLSASLAAA AKGSLNVEHPATGGTAFVLALPLVSPPSESAEHP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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