Pseudomonas sp. LAIL14HWK12:I6, D907_RS0110185
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGCAGAGCCTGCCCATCCTGATGCTGACGGCTCGTGATGACAGCCATGACCAGGTGCTGGGTCTGGAAATGGGGGCCGATGATTACGTGACCAAACC CTGTGAACCACGCGTGCTGCTGGCCCGGGTGCGTACGCTGCTGCGTCGTAGCAGCATCAATGAGCCGCGCCTGGACCACGACCTGATCCTGATCGGGGGG TTGCGCATCGACCTGGCCGAGCGCACGGTCAGCTGGCGTGGCGAAGAAGTGGAGCTGTCCAGTGGTGAGTACAACCTGCTGGTGGTGCTGGCACGCAATG CGGGCGAGGTGATGAACCGCGACCGTATCCTGCAACAACTGCGCGGTATCGAGTTCAATGGCACCGATCGTTCCGTGGACGTGGCCATCTCCAAACTGAG GCGCAAGTTCGACGACAACGCCGGCGAAGCACGCAAGATCAAGACCGTGTGGGGCAAGGGTTACCTGTTCAGCCGTGTCGAGTGGGAGTGCTGATCGACC
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| DNA Sequence for Gene |
>D907_RS0110185
ATGCTCAAGATCCTGGTGCGGCTGTACCTGGTGATCATCGTTGCCTACGCCGGTGCGTTGCTGTTCATCCCCGACACCATTGTCGGCCTGTTCCGCGACC GCTTCATGGCCTACAACCTGGACCAGGCCAAGGGCGTGCAGGCGTTGATCGTGCGCCAGTTCCGCCAGGCCCCGCGCGAGCAGTGGCCAGCCGTGGCGCA AGAACTGGCCAGCGATTTCGCGCCGCTGGAATTGCAACTGCTGCGCATTGACCAGGCCAGCCTGAGCGATGAGGAACAGGCGCGCCTGGAGCATGGTTTG TACGCGGTGCGCATTGCCGAGTGGGGTTACTACGAAACGGTGTTGGCACCGCTGGACAAGGAATGGCTGGTGCGCCTGCACTCACCGCCAGACCCGCTGG ACATCAACGTGTTGTCGTGGGGGGTGACCGTACTGATCGGTGCGGCCATGCTGGGGTGCCTGCTGCTGTGGGTATGGCCGCACTGGCGCGACCTGGAGCG CCTGAAGGAAACCGCCCGGCGCCTGGGCCAGGGGCAGATGGCCGAACGTACGCACATTTCGCCGCATTCCAACATTGGTGAGCTGGCCGGCGTGTTCGAC ACCATGGCCAGCGACCTGGAGCGCCACGTCAACCAGCAGCGCGAGCTGCTGAATGCAGTGTCGCACGAATTGCGCACACCCCTGACCCGGCTGGATTTCG GCTTGGTATTGCTGTTCGACGAAGTACCGCCGGCCAGCCGCAAACGTCTGCTGGAACTGGTGGGGCATGTGCGTGAGCTGGATGAACTGGTGCTGGAACT GCTGTCCTACAGCCGGCTGTACAATGCCGACCAGGCCCGCGAGCGAGTTGAAGTATCGTTGCTGGAGCTGGTCGACAGCGTGCTCGGTGGTTTTGCCGAG GAACTCGATGGCCGGGGTATCCGTTGGGAAGTGCAGGCCGAGGATAATCTGCCCCGGTTCGTGCTGGACCCGCGCTTGACGGCGCGTGCGGTGCAGAACC TGGTGCGCAATGCCATGCGTTATTGCGATGAAAGCCTGTTGCTGCGCCTGCGGCTGGAGGGCGATGGTGCCTGCCTGCTGACAGTGGAGGATGACGGCAT TGGCATACCGGTTGAGGAGCGCGAGCGGATTTTCCAACCGTTCTACCGCCTGGACCGCAGCCGCGATCGCAACACCGGCGGGTTTGGCCTTGGCTTGGCG ATCAGCCGGCGAGCGATCGAGGGGCAGGGCGGGACCTTGACGGTCGCGCAATCGGCACTGGGCGGTGCGCAGTTCAGGATTCGGCTGCCAGCCGGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCACAACACAAACCGGTCTTTGCCCGTGTGCTTGGCTTCATACAGCGCCTGGTCAGCCTTGATCAGCGCCATGGTCAACGTATCGCCTGGGGACACCTG CGCCAGGCCGATACTGATGGTTACCGGGTGTGTGCCTGCATCTTCACGCACTCTGCGTACCAATGCCTCCACCTGCTGTTCAGCACTTTGCTGGTCGAGC CCTTCAAGAAAAATGGCAAATTCCTCACCGCCCAATCTTGCAAACTCGGAATCGACCATCGCCGCCTTGATGTGCAGTGCCACGCGTCTGAGCACTTCGT CACCCACGTCGTGGCCAAAACGGTCATTGACCTTCTTGAAATTGTCTATGTCGACCATCGCCACATACTGCCTGGGCGTCGCCCGTTTCAATTGCTGCTC TGTTTTTGCCATGAACGAGCGGCGGTTGGGGATTCCGGTCAGGGCGTCGACATAAGCCTGCTCAAGCAGCACCTTCGACAGGTAGAAATTGTGCAGCTTG
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| Amino Acid Sequence |
>histidine kinase
MLKILVRLYLVIIVAYAGALLFIPDTIVGLFRDRFMAYNLDQAKGVQALIVRQFRQAPREQWPAVAQELASDFAPLELQLLRIDQASLSDEEQARLEHGL YAVRIAEWGYYETVLAPLDKEWLVRLHSPPDPLDINVLSWGVTVLIGAAMLGCLLLWVWPHWRDLERLKETARRLGQGQMAERTHISPHSNIGELAGVFD TMASDLERHVNQQRELLNAVSHELRTPLTRLDFGLVLLFDEVPPASRKRLLELVGHVRELDELVLELLSYSRLYNADQARERVEVSLLELVDSVLGGFAE ELDGRGIRWEVQAEDNLPRFVLDPRLTARAVQNLVRNAMRYCDESLLLRLRLEGDGACLLTVEDDGIGIPVEERERIFQPFYRLDRSRDRNTGGFGLGLA ISRRAIEGQGGTLTVAQSALGGAQFRIRLPAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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