Pseudomonas sp. LAIL14HWK12:I6, D907_RS0107665
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACACAGCCTGCAGGGCGGTACTACTCACTGGCTGCGCCCACGCCTGCTCGGCTATGCCGCTGCGCTGGTGGTGATGATCGCGGCGCTGGTGGTGGCCT TGCAACTGCGCCCGATGGTGTCGCTGGATGTGATCAAGGACCGTGGCCTGTTCCGTGAAAATGCCTTGGGCCAGATCGAGAACATCTACCTGCTCAAGGT CATCAACAAGACCGAGCGCACCCAGCACTATGCGTTGCGCCTGCTGGACGCCGACGGCTTCACCTTGCAGGGCAACACCGCGTTGGTCATCCCGGCGGGC GAAATGAGTGAACTGCCGGTGTCGGTGGCGATGCTCGCCGAGCACCCGACCAGCAGCTCGCAAACACTCAGCTTCGAAATCAGCGAGCGTGACGACCCCG CCATCCGCAGCGTGGCCCACAGCCGCTTCGTCGCCCCCATGAACCGTTGATCCCTTACACTGACGCCACCTTGCCTGCCAGGCTTCGACAGAAGGCCAGA
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| DNA Sequence for Gene |
>D907_RS0107665
ATGAAACGCTACGAACGCTTTGCCGACGACATTGCCGAACTGATCCGCTCCGGGGTACTGGGCCCCGGCCAGCGCGTGCCCTCGGTGCGCTACGCCAGCC AGACCCACGGGGTCAGCCCTTCTACCGTTTTCCAGGCCTATTACCTGCTGGAGCGGCGCGGGCTGATCCGCGCCCGGCCGCGCTCGGGATATTTTGTCAA CGCCCACGCCCCACGCCAGTTCAGCGAACCTCAAGCGCTGCAGCCGGTCAGCGAGTCTACCGATGTCGACGTCAGCGCCTTGGTGTTTTCGATCCTCGAC TCGATCAAGGACCCCAACACCATACCGTTCGGTTCGGCCTTCCCCAGCCCCGAACTGTTCCCGCTGCAACGCCTGTCGCGCTCGCTGGCCAGCGCCAGCC GCAGCATGGACCCGCGCATGGTGGTCACCGACCTGTCGCCCGGCAACCCGCAACTACGCCGGCAGATTGCCCTGCGCTACATGGTTGGCGGGCTGATGCT GCCCATGGAAGAACTGCTGATCACCAACGGCGCACTGGAGGCCCTGAACCTGTGCCTGCAGGCAGTGACTCAGCCCGGCGACCTGGTAGCCATCGAGGCC CCGGCCTTCTATGCCTGCCTGCAGGTACTGGAGCGGCTCAAGCTCAAGGCGGTGGAAATCCCGGTGCACCCGCGCGAAGGCATGGACCTGAGCGTGCTGG CACAAACCCTGGAGAAGCACCCGGTCAAGGCCGTGTGGTGCATGACCAACTTCCAGAACCCGGTGGGCGCCAGCATGCCGGAAGCCAAAAAACAGGCCCT GGTGGAGTTGCTGGCGCGCCATGAGGTGCCGTTGATCGAAGACGACGTGTACGCCGAGCTGTACTACTCGCAACAGGCGCCCAAACCGGCCAAGGCCTTC GACACCCAGGGCCTGGTGATGCACTGCGGCTCGTTCGCCAAAAGCCTGGCACCGGGCTACCGCATCGGCTGGGTCGCCGCCGGGCGCTTTGCGCAGAAGA TCGAACGGCTGAAACTGATGACCTCGCTGTGTGCCTCGATGCCGGCCCAGGCGGCAATTGCCGACTACCTGCAGCACGGCGGCTACGACCGCCACCTGCG CAAGCTGCGTTACGCGCTGGAAGGCCAGCAGGCCAACATGCTGGCGGCCATCGCTCGCCACTTTCCGGCGCAGACGCGGGTCAGCCAGCCTTCCGGTGGC TACTTCCTGTGGCTGGAACTGCCCGAACAAATGGACGCCCTCAAGCTGTTCCACATGGCCTTGGCGCAAGGCATCAGCATCGCCCCCGGGCCGATCTTCT CGCCCACCCGGCGCTTCGGCAATTGCATCCGCCTGAACTACGGAAGCCCTTGGCATGACGGCGCCGAACGGGCCATGGAAACCCTCGGGCGGATCATCCG CTCCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATCGAACACCCGGCGGCCGAACGACGGCTGCCGGGCATCGCCCGCCAACTGTACTGACCCGCTATTCGCATGCAGATGAACACGCTAAAGTCAGAGCC TCCCCTTTTGTCGGACGTCGGCATGCCCTCCCGCGACCTGCGCTCACTGCGCCAACACGTCGAAGCCCTTCAGCGGCAGAACGCGCAACTGGAATCCCAG CTTGCCAGCCTCCAGGACCACGATCAGAACTTCTACCGTTCGTTGTTCGACACCATGGACGAAGGCTTCTGCATCATCGAGTTCTTCGACGGCCCGCACG GCCCGCTCAGTGATTACGTGCATGTACTGGCCAACGCGGCCTACGCCAAGCACGCCGGCATCCCCAACGTGGTCGGGCAAAAGCTGCGCGAGATGGTGCC CGATGAAGCCGATGACTGGGTAGCCCGCTATGGCGCAGTGCTGCGCACTGGCGAGCCCCTGCATTTCGAGCAGGAACTGGTCGCTACCGGCCGTGTGCTG
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYERFADDIAELIRSGVLGPGQRVPSVRYASQTHGVSPSTVFQAYYLLERRGLIRARPRSGYFVNAHAPRQFSEPQALQPVSESTDVDVSALVFSILD SIKDPNTIPFGSAFPSPELFPLQRLSRSLASASRSMDPRMVVTDLSPGNPQLRRQIALRYMVGGLMLPMEELLITNGALEALNLCLQAVTQPGDLVAIEA PAFYACLQVLERLKLKAVEIPVHPREGMDLSVLAQTLEKHPVKAVWCMTNFQNPVGASMPEAKKQALVELLARHEVPLIEDDVYAELYYSQQAPKPAKAF DTQGLVMHCGSFAKSLAPGYRIGWVAAGRFAQKIERLKLMTSLCASMPAQAAIADYLQHGGYDRHLRKLRYALEGQQANMLAAIARHFPAQTRVSQPSGG YFLWLELPEQMDALKLFHMALAQGISIAPGPIFSPTRRFGNCIRLNYGSPWHDGAERAMETLGRIIRSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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