Pseudomonas sp. LAIL14HWK12:I9, D903_RS0120145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCAGCGAGCGTTTGCTGGCGATCCTGAAGGATTACCGCGACCACCTGACCGGCGCGGTGGTGCACTGCTTTACCGGCGAACGCGAGGCACTGTTCGCT TACCTGGACATGGACCTGCACATCGGCATTACCGGCTGGATCTGCGACGAACGCCGTGGCACTCATCTGCACCCGCTGGTAGGCAACATTGCCGAAGGCC GGCTGATGCTGGAAAGCGACGCCCCCTACCTGCTGCCACGCAGCCTGCGTCCCAAGCCGAAGAACGGGCGCAACGAGCCGGCGTTTTTGCCAGAGGTGCT GCGTGAAGTCGCCTTGCACCGGGGCGAATCCGCCGAGCATACGGCTGCTCACACCACCGCAACGGCGCGGGCATTTTTCCAGCTTCCGTGAGCCCTGCGT GCGGGCTGTTGATATGTATCAACATCTTGCTGAGTAGATACAGGCACAATGATGGCACCTTGCCAATATTGTTTCCGCTCAACTCAGAGAAGACCTGCCC
|
|
| DNA Sequence for Gene |
>D903_RS0120145
ATGGGTGCCTGGCTTAGCAATGTTTCCCTGAAGTACAAATTCTGGGCCGTCAACGCGGTGGCCTTTGTCACGACCTTGCTGCTGGTGCTCTACGCCGTGC ACCTGGAGCAACGCGCCCGCGCCGAGGCAGCGCAGGCCCAGGCGGCTGCACAAGCCCAGCTGATCGCCGCCTGGCCGGCTGGGCAAGCACTGCCCCGCCT TGCCAATGTCATCAGTTGGCCTGCGGGGCAAACGCCGACGTTCGCCGGTGAGGCGCTCGACCCCCTGCGCAACGCCCAAGGCTGGGTCGAACTGCCAGGC GCCTGGGTCCTCGGAGAAAACCCGCTGCGCGGCGCACAGGTGCTGCGCAACGGTGACCAGCAAGTGGCCGTGGTGGCACAGTCGCCAAGCCTGCGCCAGG TGTTCTTCGACCGCTTCAGTAACTACGCGGTGTGCGTGCTGATCCTGATGCTGGCCATGCTCGGCGCTTCGCAGTTGCTGATCCGCTTCCTGCTCAGCCA GCTCAACACCCTGAAAGACGTGATGCTGCATGTGGAGAAAACCGGTGACCTGGCCGCCCGCGTGCCGCTGGCCTGCGGTGACGAGGTCGGCCAGATGGCC GGGGCCTTCAATGCGATGCAGGCCACCTACCACCGGGTCGTCAGCACTGTTGCCCACACGGCGGCACAACTGGACTCGGGCGCCGCACGCCTGGCCGCCA GCATGAGCGACGTGCGCCACGGCATGCTCGGCCAGCAAAGCGAAACCGACCAGGCCGCCACCGCCATCAACGAAATGTCAGCGACGGTACACCACATCGC CGAGCATGCCGGTGCCACCCGCGACCTGTCGCAAACCGCCGACACGTTGGCCGGCAGTGGCAAAGAGGTGGTCAGCCGGGTACAGGACTCGATTTCCGGG CTTTCCAGCGGCGTGCAGCAAACTGCCGAAATGATTCGCCAACTGGCCGACGACAGCCAGAAGATCAACGGCGTGGTCAGCGTGATCCACAGCATCGCCG AGCAAACCAACCTGCTGGCGCTCAACGCTGCCATCGAAGCAGCCCGTGCTGGCGACCTGGGGCGTGGCTTTGCCGTGGTGGCCGATGAGGTGCGCAACCT GGCCAAGCGCGTGCAAACCTCTACCGACGAAATCACCACCATGGTCTCGGCCCTCCAATCGGGCACCCGCGATGCGGTGGAGTTCATGCAGGAAAGCTCT TACAAAGCCGACGACTGCGTGCGACAAGCCCAGGAGGCCGGCGAAGCGCTGGCCGAGATTACCGGCGCAGTGGCGCAGATGCGCGAAAGCAACACCCAGA TCGCCGTGGCCGCCGAGCAACAAAGCCAGGTGGCCGAGGAAATGAACCGCGCCGTGGTGAGCATCCGCGATGTCACCGAGCAGACCGTGCAGCAGACGGT GGGCTCGGCCACCACCAGCAGCGAACTGGCGACCCTTGCCGGCGAACTCAGCAAGGCCATTGGCCAGCTCAAGCTATAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCACCATAGCCAGCCTCGATTGGCCCCCGTCCGGAGGCCGCACTAAGCTTTGGGCATGACCGTGAGGAAATGCCCATGAGCAAGCGTCTGCCCAACCTGC CCGCCTGGCAGTGGCGTGGCTACCACCACAACCACCGCCACCCAACCAACCTCGTGCTGCACCTGATTGCCGTGCCGCTGTTCATTCTGGGTGCGCTATT GGTTCTGTCCGGCCTGTTCGCCCTGGATCTGGGGCAGATTGCTGTTGGCGTGATCGCCCTGATTGCGGGGCTTGGCTTGCAGCGCCAGGGGCACCGGCTG GAAGCCGAGCAGCCTGAGCCGTTCGCCAATCGTCAGGACGCCGTGCAGCGATTGCTGACCGAGCAGTTCATTACCTTTCCACGCTTTGTGCTGAGCGGGG CGTGGTGGAAGGCCTGGCGGGAGCGGCACAAGCACCGGCATTGATGCCAGGCGCTGTTTTGCGCTCTCAGGATTGATCAGGCAAATACGGTCACGGTCTG
|
|
| Amino Acid Sequence |
>chemotaxis protein
MGAWLSNVSLKYKFWAVNAVAFVTTLLLVLYAVHLEQRARAEAAQAQAAAQAQLIAAWPAGQALPRLANVISWPAGQTPTFAGEALDPLRNAQGWVELPG AWVLGENPLRGAQVLRNGDQQVAVVAQSPSLRQVFFDRFSNYAVCVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLAARVPLACGDEVGQMA GAFNAMQATYHRVVSTVAHTAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATAINEMSATVHHIAEHAGATRDLSQTADTLAGSGKEVVSRVQDSISG LSSGVQQTAEMIRQLADDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITTMVSALQSGTRDAVEFMQESS YKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTEQTVQQTVGSATTSSELATLAGELSKAIGQLKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|