Pseudomonas sp. LAIL14HWK12:I9, D903_RS0118970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00010.10_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCATGACCACGCGGCTCATGTTCGAGCTCAAGCGCAGCAGGATGCGCGAGTTCAAGCCGTCGGAAGTGCTTAGCCATATCAACCGCGGCCTGATCAATA GCAAGCTGGGCAAGCACGTCACCATGGTCGGCGGTGTGATCGACGAAGAGTCCGGTCTGCTGACCTACGCCGTTGGCGGCCATCTGCCGCTGCCGGTGCT GTACACCCCCGATCACGCCCGCTATCTGGAAGGCCGTGGGCTGCCGGTGGGGCTGTTTGAGGAGGCCACCTACCAGGACCTGGTAGTGGAGCTGCCACCG CAGTTCAGCCTCAGCCTGATGTCCGATGGCATTCTGGACCTTTTGCCGGGTGACACGCTCAAAGATAAAGAAACCGCCTTGCCGGAGATCGTCAAGGCAG CAGGTGGCAGCCTGGATGGGCTGCGTCAACGATTCGGATTGGCTACGCTTGGGGAGATGCCGGATGATATCGCCCTATTGGTGTTGAGCAGGAACCTTCA
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| DNA Sequence for Gene |
>D903_RS0118970
ATGAGTACCGGTAGAATCCAGTTCGCCGAGCAGAGTGGTACCTTCGTACTGAAATTTGTCGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGA CGATCGAGAAGATTTTCACGGCGTTGAACTTCTCGGCGATTGTCATCGACCTGACTGAAACCGAAAGCATCGACAGCACCACCCTGGGCCTGCTGGCCAA GCTGTCGATCCTGTCGCGGCAGAAGGTGGGCTTGCTGCCGACCGTGGTTACCACCAACCCGGACATTTCCCGGTTGCTGCAGTCGATGGGCTTCGATCAG GTGTTCAACATCGTCGATCGCCCAATTCCGTGCCCGGAATGCCTGACCGACCTGCCATCGCAGGACCAGAACGAAGACGTGGTGCGCTCCAAGGTGCTGG AGGCGCACAAAATCCTCATGGGCCTGAACGACTCCAACCGCGAAGCGTTCCATGACCTGGTCAGTGCGCTGGAGCGAAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGTCGCCCGGCTACCGCCCGGCAACAAACTCGGTTGCTTCAGCGCCGCCGGCATCCAGCTGAAATACCCGCACTGGCCGCCCCTGTTCGTCGAAGAAC ACCTGCCCCAACCCCGCCCCGTTCCACAGCCGCTCTCCAGCCTTGCTGTGGCTGGGCGTACGCGGTACCACTTCCATCTCCCGACGTCTGGTGAACCAGT TCAACGGCGAGCGTGGCGAATACAGCCAGCGGTTGAGCCGGTCGAGCACATCCAGCAAACGCCGGGGGAACTCGTTTTTGATCCCGCTGCTGGTCACCTG CCACAGGTGCGGGCTGCGCTGGCGGTGGCGGATCAGCACTTCATAGACGAACGAGTAGTGCACATCCCCGGACAGCACCACATAGTGCCCCGGTGTACGG GAGTGGCGGAAGATGTTGAGGATGACCTGCGCCGCCCCTCGGTGGGCCATCCAGTTTTCGGCATCCACCAACAGTGGATAGCCCAGCCAGCTGAACACCT
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| Amino Acid Sequence |
>anti-anti-sigma factor
MSTGRIQFAEQSGTFVLKFVGEVRLTLCSALDATIEKIFTALNFSAIVIDLTETESIDSTTLGLLAKLSILSRQKVGLLPTVVTTNPDISRLLQSMGFDQ VFNIVDRPIPCPECLTDLPSQDQNEDVVRSKVLEAHKILMGLNDSNREAFHDLVSALERS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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