Pseudomonas sp. LAIL14HWK12:I9, D903_RS0117950
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCTAGCCCGCCATAGGCTGCGATAGTGCCTGTGAGTGGGTCTTCATTGATTGGAAAGAACAGTTCACCAAATACCAGAGCTGCCGCCGTTCCATATAA AAAGAAGTCATACCATTCCAAGATCTGACCAATAACGGATATGAAAACAGAACGGACCGCGCGGGGGGAACCTGATTTGGGCGAAACGCCACTTATTGGT GCAGTCATCTTATTCTTCACCTCATAAACGACCTAATAAAAGGCACGGGCACACAGGGTTTTTTTGATATTTCATTTTGTTGACACAGTAGTTTTGCCGT GCGGACAGGGTCAAATGATCAAGCGTTATGTGCGCAATGCATCAGATGAATAAGCCTCTCAGTTGTTGTTCTGACGGCGTGAGTGAGAACCTGGTGAAAA AGTTTCCCCGGCGCCGCGCTGCCGCCGCATAATGGCTCGGCGGCATGCGCTGGGAAAGCAGCACGCTCTCGTGGGTCTAACTTTCAGTACGAGAATTTAC
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| DNA Sequence for Gene |
>D903_RS0117950
ATGACGAAACACATCAATCTGGCTACGATCGATTTGAATTTGCTTAAAACGTTCATAGCGATCTGGGAGCACCGGAGCCTGACAATAGCGGCCGATCGCC TGCACCTCAGCCAGCCAGCGGTCAGCCACGCTCTGCGTCGCCTGCGTGATATTTTCGATGATCCACTGTTCGTCCGCACAGCGACTTCAATGGAGCCGAC CGATGCGGCGCTGCGCCTATCCGGGCCTATAGAACAGGCCTTGGTCATTATCCAGGGCGCCTTGATGAGTTCGTCGCGCTTCGACCCTGCAACCGCCACG CGCACGTTTCGCATCTCAATGTCAGATATGGCGCAGCTATATGTCCTGCCGCGGATCATGGAGGTGCTGACATGCCAAGCGCCAGGCGTTAGTTTGGAAA TTCAGCCGCTGCCGATCGACCAACTGACCGTGGCCCTGCGCAAGAGCGAAATCGACCTTGCGCTGGGTTACCTGGCCGAGCCCACCGAAGACTGTCTGTA TGAGAGTCTGCTGGAAGATGAGTTCATCTGCCTGCTGCGCAAGCATCACCCCTTGCAGACGAGCGAGCTGACTCTCCAACACATGCAGACGCTGCGCTAT GTGCACGTATCGAGCAACATCACTGGCCACGGTCAGACCGCAGACGCTGCGTTTCGCAAGGTTGGTCTGCAGCGGGGCATAGCGCTGAAGGTTCCCAACT TCACGATCGCGCCCGAAATCGTCGCCAGTACCGATCTTGCCTTAGTAATGCCACGCGCCATAGCGATGCAAAACAACAAGGCAGGCGCGTTTCGTGTGCT GCGCCTGCCTGTGGAGTTGCCAAGGATATCTGTCGGCCTCTATTGCCACAGGCGTTTTTCGTCGGACTCGGGTATCGCCTGGTTGCGCACATTACTGGTG GGTTTGTTGGCGGACACGCCAGCGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTGGCAGACCAGGTTTGGGATTCCCCTGCCGCTCCAACCGTTCAACACTCGCAGGTATGCATGGGGTAGTGCGGGCTTTCGCCTACGAAGCGAGGCAG GCTTAGATAATCCTCCCGCAAGGCTTCTCGTTGCGGCGAAGCCAGCGCATCACGCAATCCCTGCGCCGAGTCGAACACCACCTTGTTGCGCTGCAGTGCG TTGCTACGCGCCACGGGCAACTGGCTACAATAATCGAGTCGCGTGTATACCTCTACGCTGCGTACATTGGGTAGTTTTGCCAGCAAGGGCGGATGCTGGT GCAGGTAGCGCTCGATCCAATCCGCTTCGTCTTCAACGTGCCCTGAATAGTGCACCAGATACGTCACTTGCTCCTCGCTTCTGGGCAGAATCTGCGGGAC CGGACTGTCGCCGAAGCGTCGAACCAGCATCACCTGTTGCTCCCATTGGTAACCGGCCAAGTTCGAAGCTTGCACGAAGGTTCCGAGTTTCCCCTCGGTA
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MTKHINLATIDLNLLKTFIAIWEHRSLTIAADRLHLSQPAVSHALRRLRDIFDDPLFVRTATSMEPTDAALRLSGPIEQALVIIQGALMSSSRFDPATAT RTFRISMSDMAQLYVLPRIMEVLTCQAPGVSLEIQPLPIDQLTVALRKSEIDLALGYLAEPTEDCLYESLLEDEFICLLRKHHPLQTSELTLQHMQTLRY VHVSSNITGHGQTADAAFRKVGLQRGIALKVPNFTIAPEIVASTDLALVMPRAIAMQNNKAGAFRVLRLPVELPRISVGLYCHRRFSSDSGIAWLRTLLV GLLADTPAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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