Pseudomonas sp. LAIL14HWK12:I9, D903_RS0116975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTGTACCTGCTGATCATCCTCAGCGGCTTTGTCGAACCGGATTTCTGGTGGTTGCTGGGGATCATGGCGCTGTTCTCCTGGCTGACGTTGGTCGATG TGGTACGCGCCGAGTTTCTGCGTGGGCGCAACCTGGAGTATGTAAAGGCAGCCCGGGCGTTGGGCCTGCCGGACAGCCAGGTGATGCTGCGACATATTTT GCCCAACGCCATGAATGCCACGCTGACCTACGTGCCATTCATGCTGACCGGGGCGATCACGACCCTGACCGCACTGGATTTCCTCGGGTTTGGCATGGCG GCCGGGAGTGCTTCGCTGGGTGAGTTGGTGACCCAGGGCAAGCAACACCTGGAGGCGCCATGGCTGGGCTTTACCGCGTTTTTCGCGCTGGCGGTGATCT TGTCGTTGCTGGTGTTTATCGGGGACGCCTTGCGCGAAGCATTCGACCCCAGAGGTTAGGTTTTACAGGCCCGGCCTTCACATGATTCGGAATTTGCCCC
|
|
| DNA Sequence for Gene |
>D903_RS0116975
ATGCACGACAGCGACAGCCTCAAGAACTACCCCCAGGTACGGCAACTGGCAATTCACTCGCTGTTCGAGATTATCGAGCAGTCCAGCGAAGGCACGGTCA TCGTTGACCGCAATGCACGTATCGTCTGGATGAACGAACGCTACGCCCGGCGCTTTGGCCTGGCCGATGCCGCCAGTGCCATCGGCCAGCCATGCGAAGC GGTGATCCCGGGCAGCCTGATGCGCGAGGTGGTGAGCAATGGCCGGCCAATCCTGCTGGACATGCTCGACACCCCGAACGAGCCCTTGGTGGTGATGCGC CTGCCGATCCACGACGACCAGGGCGCTCTGATCGGTGCCATCGGCTTTGCCCTGTTCGACGAACTGCGCAGCCTGTCGCCACTGCTTAAACGCTACGCCA GCATGCAGCAGGAACTGGCCTCGACCCGCTCGCAACTGCGCGCCCGCCAAGCCAAGTACAGCTTCGCCCAGTTCGTGGGCAGCAGCGCTGCCAGCCTGGA AGCCAAGCGCCGCGCCCGGCGCGGTGCGGGCAGCGATTCGCCGGTGTTGTTGCTGGGCGAAACCGGTACGGGCAAAGAGCTACTGGCCCATGCCATCCAC GCGGCTTCGGCGCGGGCGCACAAAGCCTTCGTCAGCATCAACAGTGCAGCGATCCCTGAAACGCTGCTGGAAGCCGAATTTTTCGGCACCGCGCCGGGTG CGTTTACCGGCGCCGACCGCAAGGGCCGCAGTGGCAAGCTGCAGTTGGCCGAAGGCGGCACGCTGTTCCTCGACGAGATCGGCGACATGCCGCTAGCCCT GCAGAGCAAGCTGCTGCGCGTGCTGCAGGAAAAGGAATACGAGCCGGTTGGCTCGAACCAGATGCTGCGCAGCGACGTGCGCATCATTGCCGCCACCTCC ATCGACCTGCAGGCGGCCATGGCCCGTGGGGCGTTTCGCGCCGACCTGTATTACCGGCTGAATGTGCTGCCGATCGACGTGCCGCCGCTGCGGGAGCGAC TGGAGGATTTGCCAGCGCTGTGCGAGACCATACTGGGTGAACTGGGCAGCCAGTACGAGCTGGAGGCCGAAGCGCAACAACTGCTGGCGCGGCATGCATG GCCGGGGAACATTCGCGAGCTGCGCAATGTGCTGGAGCGCGCGACATTGCTGGCGGATCAGCCACGGTTGGGGGGGGCGGACTTGCGTGCGGCATTGGGG CCGTTGAGCCCGGTAGCGGGCGGGCCGGTGCGACAGACATACCGGGAGGCCTGCGAGGCATTCGAGCGCAAGCTGATTGGCGAGGCACTCGCAGAATGCG AGGGCAATGTACCGCAGGCTGCTAAGGCGTTGGGGCTAGGACGGTCGACCCTGTACAAGAAGATGGTTGCACTCAGTCTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTAGAGACTCTAGTTTCTATATTGAGACTATGGCAAGGGCTTTGCCCTTGTGCCTCGAAGTGACGCAAAGCGAAAAAAAATCTCGAATTAGAGACAAATA TTTTAGAAAAAACAAAAAACATCTATAAATCAATGACTTAAATGTTGGCACGATTCCCGCTATCTCCTGCACACCGATAAAAACAAGACTCACCCAGGAG ACCCACCCCGATGACCGTGCTCATCGCCCTCGCCGCTCTGGCCCTGCTGATGCTGGCTGCCTATCGCGGTTACAGCGTAATTCTCTTTGCCCCCATCGCC GCCCTCGGCGCCGTCCTGCTCACCGACCCCTCTGCCGTGGCCCCCGCGTTCACCGGGGTGTTCATGGAGAAAATGGTGGGCTTCATCAAACTCTATTTCC CGGTGTTCCTGCTGGGCGCAGTATTTGGCAAGCTGATCGAACTGTCCGGCTTTTCCCGATCGATCGTCGCCGCCGCCATCCGCCTGCTTGGCACCCGTCA
|
|
| Amino Acid Sequence |
>Fis family transcriptional regulator
MHDSDSLKNYPQVRQLAIHSLFEIIEQSSEGTVIVDRNARIVWMNERYARRFGLADAASAIGQPCEAVIPGSLMREVVSNGRPILLDMLDTPNEPLVVMR LPIHDDQGALIGAIGFALFDELRSLSPLLKRYASMQQELASTRSQLRARQAKYSFAQFVGSSAASLEAKRRARRGAGSDSPVLLLGETGTGKELLAHAIH AASARAHKAFVSINSAAIPETLLEAEFFGTAPGAFTGADRKGRSGKLQLAEGGTLFLDEIGDMPLALQSKLLRVLQEKEYEPVGSNQMLRSDVRIIAATS IDLQAAMARGAFRADLYYRLNVLPIDVPPLRERLEDLPALCETILGELGSQYELEAEAQQLLARHAWPGNIRELRNVLERATLLADQPRLGGADLRAALG PLSPVAGGPVRQTYREACEAFERKLIGEALAECEGNVPQAAKALGLGRSTLYKKMVALSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|