Pseudomonas sp. LAIL14HWK12:I9, D903_RS0114395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 40 | 144 | 2.1E-18 |
| PANTHER | PTHR30069 | TONB-DEPENDENT OUTER MEMBRANE RECEPTOR | IPR039426 | TonB-dependent receptor-like | 18 | 682 | 4.4E-76 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 225 | 680 | 4.0E-49 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 508 | 529 | - |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 38 | 154 | 4.1E-28 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 210 | 237 | - |
| CDD | cd01347 | ligand_gated_channel | - | - | 45 | 682 | 4.04883E-60 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 158 | 682 | 8.0E-74 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 38 | 682 | 2.09E-97 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 210 | 230 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.