Pseudomonas sp. LAIL14HWK12:I9, D903_RS0110430
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACGAGGTGCGTGTGGTCTTGCGTGAGGGGGAGCGCGGGGAGGATTTCGGGTTACCTGCCGGTTGCCGGGTAATCGGCAGCCCAGATGCCGCGTCCGGT ATGGGGCATAGCCTGGCTGTCGGGGCACGGTCGCTTCACGACAGCCAGGCACAGGCGGTAGCGATTTTGCTGGGTGACATGCCATGGATCGAGCCGGCAA CCCTGGGCCGGCTGGTCGGGGCCGCCCATGCGTCCCGTATCGTGCTGCCACGCCATGCAGGGCAGCAGGGGCACCCGGTGATCTTCGGGCGGGATTTCTG GCCGGCGCTGGGGCAACTGCATGGCGATGAAGGGGCACGCTCGGTGGTGCAGGCTCACCGGGGTAGCTGTGTGGTGGTCGAGCTGGAAGATGCGGGGGTA TTGCTGGATGTCGACACGCCGCAGGGCCTCGCTTGGTTCATAATCCCACCTTAATCCGCCCAAGGTGCAATGCCAGCCATACCACTCCGGGAGCCCCACC
|
|
| DNA Sequence for Gene |
>D903_RS0110430
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGCATCTGCGCCGGCCTTACTGCCCAGGGCTTGACCGTTGACCGGGTGGGTAACGCCG CCGGTGCGCGGGCGATGCTGCAGGCCGCGCAGTTCGATGTGATGATTCTCGACCTCGGCCTGCCTGACGAAGACGGCTTGAAACTGCTGCGCCGCCTGCG CCAGCAGGGCGAAACACTGCCGGTACTGGTGCTGACTGCCCGTGATGCCGTCACCGACCGCGTCGATGGCCTGCAGGCCGGTGCCGACGACTACCTGCTC AAACCCTTCGACCTGCGCGAGCTGGCCGCTCGTCTGCACACCCTGCTGCGGCGGGTGGCGGGGCGGGCGGTGAATGTGATCGAACACGGGCCTTTGCGTT ACGACCCCAGCAGCTGCGAGGCGACCCTGGCCGGGCGGCCGGTCGACTTGTCCCGCCGGGAGCAGGCCCTGCTCCAGGCATTGCTGCAGAACCCCGGGCG GGTGTTGTCCAGCGAACAACTGAAAGACTGCGTGTATGGCTTTAGCGACGAAGTCGAGAGCAACGCCCTGAACGTGCATATCCACCACCTGCGGCGCAAG CTGGGCAACGGCATCGTCGAGACCGTACGTGGCCTGGGTTACCGCCTGGGCCCGGCGCAGGCGCCGGAAGAGGCCGCATCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCTGCGGGTACGCCTTAGCCTGATCCTGGGCAGTGCCTTCGTGATCATCTGGGTGCTGGCCGCCGCGTGGATGCTGCGCGACCTGCGCCAGCAGATGAT GTTTTCCCTTGACCAGCGCCTGGTGGCGTCGGCGCGTATGGTCGCCGGGCTGATCGACCAGTTGCCGCAGCCGCTCACCGCCAAGGGCGGGGAGGCGCAC ATTTCTGCCGACCAGTTCAGCGTGCCGGACGGCATGGCCTGCCAGGTCAGCTCGCTGCGTGGCGAGATCCTTGCCAGCAACCACAAGCATGATGGCGCCA TGGACGACGAGCGCAGTGGCTTCCGTGACCAGACGATCGACGGTGCACTGTGGCGTACCTTCACCTACAACCATGGTGATGTGCGCATCACCACGGCTGA CCGGCACATGGAACGTGAAGCGCTGAACCAGTCGATTCTGCTGGCCGCTTCGGCACCGGTGCTGATGGCCCTGCTCGGCAGCCTGGGGTTGTTGTGGATT
|
|
| Amino Acid Sequence |
>transcriptional regulator
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAAGARAMLQAAQFDVMILDLGLPDEDGLKLLRRLRQQGETLPVLVLTARDAVTDRVDGLQAGADDYLL KPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGRPVDLSRREQALLQALLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRK LGNGIVETVRGLGYRLGPAQAPEEAAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|