Pseudomonas sp. LAIL14HWK12:I9, D903_RS0110070
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGCAGAGCCTGCCCATCCTGATGCTGACGGCTCGTGATGACAGCCATGACCAGGTACTGGGGCTGGAAATGGGGGCCGATGATTACGTGACCAAACC CTGTGAACCACGCGTGCTGCTGGCCCGGGTGCGTACGCTGCTGCGTCGCAGCAGCATCAATGAGCCGCGCCTGGACCACGACCTGATCCTGATCGGGGGG TTGCGCATCGACCTGGCCGAGCGCACGGTCAGCTGGCGTGGCGAAGAAGTGGAGCTGTCCAGTGGTGAGTACAACCTGCTGGTGGTGCTGGCACGCAATG CGGGCGAGGTGATGAACCGCGACCGTATCCTGCAACAACTGCGCGGTATCGAGTTCAATGGCACCGATCGTTCCGTGGACGTGGCCATCTCCAAACTGAG GCGCAAGTTCGACGACAACGCCGGCGAAGCACGCAAGATCAAGACCGTGTGGGGCAAGGGTTACTTGTTCAGCCGTGTCGAGTGGGAGTGCTGATCGACC
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| DNA Sequence for Gene |
>D903_RS0110070
ATGCTCAAGATCCTGGTGCGGCTGTACCTGGTGATCATCGTTGCCTACGCCGGTGCGTTGCTGTTCATCCCCGACACCATTGTCGGCCTGTTCCGCGACC GCTTCATGGCCTACAACCTGGACCAGGCCAAGGGCGTGCAGGCGTTGATCGTGCGCCAGTTCCGCCAGGCCCCGCGCGAGCAGTGGCCAGCCGTGGCGCA AGAACTGGCCAGCGATTTCGCGCCGCTGGAATTGCAACTGCTGCGCATTGACCAGGCCAGCCTGAGCGATGAGGAACAGGCGCGCCTGGAGCATGGTTTG TACGCGGTGCGCATTGCCGAGTGGGGTTACTACGAAACGGTGCTGGCACCGCTGGACAAGGAATGGCTGGTGCGCCTGCACTCACCGCCAGACCCGCTGG ACATCAACGTGTTGTCGTGGGGGGTGACCGTACTGATCGGTGCGGCCATGCTGGGGTGCCTGCTGCTGTGGGTATGGCCGCACTGGCGCGACCTGGAGCG CCTGAAGGAAACCGCCCGGCGCCTGGGCCAGGGGCAGATGGCCGAACGTACGCACATTTCGCCGCACTCCAACATTGGTGAGCTGGCCGGCGTGTTCGAC ACCATGGCCAGCGACCTGGAGCGCCACGTCAACCAGCAGCGCGAGCTGCTGAATGCAGTGTCGCACGAATTGCGCACACCCCTGACCCGGCTGGATTTCG GCTTGGTATTGCTGTTCGACGAAGTACCGCCGGCCAGCCGCAAACGTCTGCTGGAACTGGTGGGGCATGTGCGTGAGCTGGATGAACTGGTGCTGGAACT GCTGTCGTACAGCCGGCTGTACAATGCTGACCAGGCCCGCGAGCGGGTTGAAGTATCGTTGCTGGAGCTGGTCGACAGCGTGCTCGGTGGTTTTGCCGAG GAACTCGATGGCCGGGGTATCCGTTGGGAAGTGCAGGCCGAGGGTAATCTGCCCCGGTTCGTGCTGGACCCGCGCTTGACGGCGCGTGCGGTGCAGAACC TGGTGCGCAATGCCATGCGTTATTGCGATGAAAGCCTGTTGCTGCGCCTGCGGCTGGAGGGCGATGGTGCCTGCCTGCTGACAGTGGAGGATGACGGCAT TGGCATACCGGTTGAGGAGCGCGAGCGGATTTTCCAACCGTTCTACCGCCTGGACCGCAGCCGCGATCGCAACACCGGCGGGTTTGGCCTTGGCTTGGCG ATCAGCCGGCGAGCGATCGAGGGGCAGGGCGGGACCTTGACGGTCGCGCAGTCGGCACTGGGCGGTGCGCAGTTCAGGATTCGGCTGCCAGCCGGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCACAACACAAACCGGTCTTTGCCCGTGTGCTTGGCTTCATACAGCGCCTGGTCAGCCTTGATCAGCGCCATGGTCAACGTATCGCCTGGGGACACCTG CGCCAGGCCGATACTGATGGTTACCGGGTGTGTGCCTGCATCTTCACGCACTCTGCGTACCAATGCCTCCACCTGCTGTTCAGCACTTTGCTGGTCGAGC CCTTCAAGAAAAATGGCAAATTCCTCACCGCCCAATCTTGCAAACTCGGAATCGACCATCGCCGCCTTGATGTGCAGTGCCACGCGTCTGAGCACTTCGT CACCCACGTCGTGGCCAAAACGGTCATTGACCTTCTTGAAATTGTCTATGTCGACCATCGCCAGATACTGCCTGGGCGTCGCCCGTTTCAATTGCTGCTC TGTTTTTGCCATGAACGAGCGGCGGTTGGGGATTCCGGTCAGGGCGTCGACATAAGCCTGCTCAAGCAGCACCTTCGACAGGTAGAAATTGTGCAGCTTG
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| Amino Acid Sequence |
>sensor histidine kinase
MLKILVRLYLVIIVAYAGALLFIPDTIVGLFRDRFMAYNLDQAKGVQALIVRQFRQAPREQWPAVAQELASDFAPLELQLLRIDQASLSDEEQARLEHGL YAVRIAEWGYYETVLAPLDKEWLVRLHSPPDPLDINVLSWGVTVLIGAAMLGCLLLWVWPHWRDLERLKETARRLGQGQMAERTHISPHSNIGELAGVFD TMASDLERHVNQQRELLNAVSHELRTPLTRLDFGLVLLFDEVPPASRKRLLELVGHVRELDELVLELLSYSRLYNADQARERVEVSLLELVDSVLGGFAE ELDGRGIRWEVQAEGNLPRFVLDPRLTARAVQNLVRNAMRYCDESLLLRLRLEGDGACLLTVEDDGIGIPVEERERIFQPFYRLDRSRDRNTGGFGLGLA ISRRAIEGQGGTLTVAQSALGGAQFRIRLPAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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