Pseudomonas sp. LAIL14HWK12:I9, D903_RS0101175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACACGTTCCTTCATCTCGCGCGCGGCCTTGTTGGTAAAGGTCATCGCCACGATGTACTGGGCACGGATGCCGCAGTTCTGGATCAGGTGGGCAATCTTG CGCGTGATCACGCTGGTCTTGCCCGAACCTGCACCGGCGAGCACCAAAAGAGGGCCGCCGACGTAGTCACGGGCTTCCTGCTGCCGGGGATTGAGTCGGG ACATGCTAGAAACCGGGGGTCGCCAGAAAATAGCCGCGCATTCTAACAGGCATGGGGCCGTTATGGCGCGACCGTCTGACGTCTGAGTCAGACTTTTATC CGGCCTACTATTAGTGGGACTAATCCTAGCACCTGAAAAAATCATATTTGCCGGTTCGGCTCGTTTCGAGCAGGATGCACGACAAAATACGTCGGGATGC TACACCCGTAAAAACATGTATAAAAGTGAAAATCATTTTCATTAAATGCAGTAGCATACCCGCCAGTTATCGTTGCACCGTGAAGCCCTAAGGAGTCCGC
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| DNA Sequence for Gene |
>D903_RS0101175
TTGTCCACGCCTGTCGAACCTTTGCGTTTGCTGCTGTTGGCTGATGAGCCGGAATGGGCCGCCTTGTTGCACGCTTGCATGCCTGCCCTGAGCGGCAGCG CCGTGCTGCTTACCGCCCCGAACTGGGAATCCGTCGACAGCCTGTTCAGCAATGATCGCCAGGCTGTGGTGCTGGCAACCCCGGCCCTGCAGCCCGTGCC CGGGCGCTGCGACCTGCCGACCATCCTGCTGCTCGACCACGAGCCCGAGGTGGCGCCCACGGCCGTCAGCGACTGGCTGGTACGCGGCCAGCTCAATGCC GATACCTTGCGCCGCTCGCTGCGTCATGTACGTGAGCGTGGAGTGCTGGTGGCCACCTTGCAGCGCCTGGCTGAGCAGGACCCCCTGACCGGCATCGCCA ACCGCCAAGGTTTCCAGGCCTTGCTGACTGCGCGCCTGGCCGAAAACGAAGGCCGTGGCGTTGCCTTGGGCCACCTGGACCTGGACAACTTCCGCCACGT CAACGATGCCCTCGGCCACCAGAGCGGCGACCGGCTGATTTTGCAGGTGGTGGCGCGGCTGCAAAACCAGCTGGAGGCGGGTGACCAGCTGGCCCGCCTG GGCAGCGACGAGTTTGCCCTGCTGATCGACACCCGCCGCGACGCCAACCGCGCCGAATGGATTGCCGAGCGTATCGTCGAAGCCTTGGCCGAACCCTACT TCATCGACGGCGAAAGCCTGCTGCTGGGCTGCAGCCTGGGCCTGGCCCATGCCCGCGCCCAAGCGGGGGCCGACCCTTTGATGTGGCACGCCCACATCGC CATGCGCCAGGCCAAGGGTAGCCAAGGCTGCACCTTCCATGTGTTCAACGAGCGCATCAACCGCAACGCCCGTAGCCTGGCCGATTTGGAAAGCGAGCTA CGCCGCGCCCTGCGCCGTGATGAGCTGGAGCTGCACTATCAGCCACGGCTTGACCTGGCGGACGGACGCATCGTTGGCCTGGAGGCGCTGGTGCGCTGGC GCCATGCCGAGCGCGGGCTGCTGCCGCCCAGCGAGTTCGTGCCGTTGGCCGAGCAAAGTGGCCTGATCGTGCCGCTGGGTTACTGGGTGATTTCCCGGGC GCTGCGCGACATGCAGGCGCTGTGCGAGCGCGGCCTGGAACCGCTGCACATGGCGGTTAATCTCAGCTTCCGCCAGTTCCAGGACAGCCAGCTGCTGGCC ACCCTGAGCCGCCTGATCATCGAGCATGGTGTGGATGCCCGTTGGCTGGAGTTCGAGCTGACCGAAACGGCAGTGATGCGCCGCAACGAACTGGTACGCC AGACCATGGATGCCCTCGGCCGCCTGGGTGTGCGCTTCTCGCTCGACGATTTTGGCACCGGGTTCTCTTCGTTCGTGCACCTCAACAGCCTGCCGATCAC CTTGCTCAAGGTAGACCGCAGCTTTGTGGCCGAAATGGAAATGCGCGAGGAAAACCGCAAGCTGGTGCATGCCATGATCAACCTGGCGCATAACCTCAAC CTGGAGGTGGTGGCCGAGGGGGTGGAGAGTGAAGCGCAACTGGCCTTGTTGCGAGGGTTTGGGTGCGATCAGGTGCAGGGCTACCTGGTCAGCAAGCCGC TGCCGGTGGGGGAATTGATCGAATTTTTGCTGGATTGCAGCAGGCCGAAGCTGGTTAGCGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATAGCAGGGGAGGGCTTCGCCCTCCTTTCGCGGCCCCAACAATCAAACAGACACCACAGACCTGTCAGGTGAACCGGCCTTCCCCAGCAGCCGCTTCAT CCGCCACTCAAAGCCAAACGTCAGCGCCACCGCCGCACACGCCAGCCCCAGCGCCAAGCCCCACCAGATCCCGACCGCGCCGGCGCCCAGGTTGAACGCG AACAGCCACGCACTCGGCGCACCCACCAGCCAGTAGCACACCAGCCCGATCAGGAAGGTGGTCTTGGCATCCTTCAGCCCGCGGATCGAGCCCATGGCAA TCGTCTGCATGCCATCGAACAGCTCGAACCACGCCGCCACCATCAGCAACTGCACGGCCACCTGGAAGATCGCGGCAAAGGCCGGGTCGTTACGGTCGAT AAACAGCCCCACCAGCGCCTCGGGCAGCAGCAGGAACAGCGCGGCGAAGGCAAACATGATCATCGCCCCGAAGCCAATGCCCACGCGCCCGGCGCTGCGC
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| Amino Acid Sequence |
>diguanylate cyclase
MSTPVEPLRLLLLADEPEWAALLHACMPALSGSAVLLTAPNWESVDSLFSNDRQAVVLATPALQPVPGRCDLPTILLLDHEPEVAPTAVSDWLVRGQLNA DTLRRSLRHVRERGVLVATLQRLAEQDPLTGIANRQGFQALLTARLAENEGRGVALGHLDLDNFRHVNDALGHQSGDRLILQVVARLQNQLEAGDQLARL GSDEFALLIDTRRDANRAEWIAERIVEALAEPYFIDGESLLLGCSLGLAHARAQAGADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARSLADLESEL RRALRRDELELHYQPRLDLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLA TLSRLIIEHGVDARWLEFELTETAVMRRNELVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLN LEVVAEGVESEAQLALLRGFGCDQVQGYLVSKPLPVGELIEFLLDCSRPKLVSV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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