Pseudomonas sp. LAIL14HWK12:I9, D903_RS0100505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACTTCCAGCAGGTAGGCGGCATCGAGTGCTACCCGGTCACCGGTGAAATCACCTATGGCCTGGAGCGCCTGGCCATGTACATCCAGGGCGTCGACTCGG TGTACGACCTGGTGTGGGCCGACGGCCCGTTCGGCAAGGTCACCTATGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCGACCTACAACTTCGAACA CGCCAACGTCGACAAGCTGTTCGAACTGTTCGACTTCTACGAAAGCGAAGCCAACCGCCTGATCAAGCTGGAGCTGCCGCTGCCGACCTACGAAATGGTC CTGAAGGCCTCGCACACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGG ACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGCTTCCCGATGGCCACCCCTGAACTGCGTGACGAAGTGTTGGCTAAGCTGGAGGCTGCACA
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| DNA Sequence for Gene |
>D903_RS0100505
ATGAGTGCTCAAGATTTCCTGGTAGAACTGGGCACCGAAGAGCTGCCACCGAAAGCCCTCGCCAGCCTCGGCGAAGCCTTCCTGGCCGGTATCGAGAAGG GCCTGCAGGCTGCTGGCCTGAACTACACCGGCAAGCAGGTTTATGCCGCACCGCGTCGCCTGGCCGTGCTGATTCGCCAGCTGGACGTGCAGCAGCCTGA CCGCAGCATCAATATCGACGGCCCACCCCTGCAGGCTGCTTTCAAAGACGGCGAGCCGACCCAGGCTGCCCTGGGCTTCGCCAAGAAGTGTGGCGTGGAG CTGGCCGAAATCGACCAGAGCGGCCCCAAGCTGCGCTTCTCCCAGCACATCCCGGGCAAGGCGACTGCCGGCCTGCTGCCGACCATCGTCGAAGATTCGC TCAACGACCTGCCCATTCCCAAGCGCATGCGCTGGGCGGCCAGCCGTGAAGAGTTCGTGCGCCCGACCCAATGGCTGGTAATGCTGCTGGGCGACCAGGT GGTCGACTGCACCATCCTGTCGCAGAAGGCCGGCCGTGAATCCCGTGGTCACCGCTTCCACCACCCGGAGAACGTGGTCATCACCACCCCGGCCAACTAC GTCGAAGACCTGCGCAAAGCCTACGTGCTGGCCGACTTCGCCGAGCGTCGCGAGCTGATCAGCAAGCGTACCGCCGAGCTGGCCATGCAGCAGGAAGGCA CTGCCATCGTGCCACCGGCGCTGCTGGACGAAGTGACTGCCTTGGTCGAGTGGCCAGTGCCGCTGGTGTGCTCGTTCGAGGAGCGCTTCCTCGAAGTGCC GCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACAGCGAAGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCCAAC GTTGAAAGCCGCGACCCGAAGCAGATCGTGCAAGGCAACGAGAAGGTCGTGCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGAAGC AGCCGCTGGAAACCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCCCAGCTGGGCACTGTGTACGACAAGGCCGAGCGCGTTTCCAGGCTGGCTGC CTTCATCGCCCCGCTGATCGGCGGCGACGCCCAGCGTGCTGGCCGTGCCGGCCTGCTGTCCAAGTGCGACCTGGCCACCGAGATGGTTGGCGAGTTCCCT GAAATGCAGGGTGTTGCCGGTTACTACTACGCGCTCAACGACGGTGAGCCGGAAGATGTGGCCCTGGCCCTGAACGAGCAGTACATGCCGCGCGGTGCTG GCGCCGAGCTGCCGCAGACCCTTACCGGGGCTGCTGTGGCCATCGCCGACAAGCTCGATACCCTGGTGGGTATCTTCGGTATCGGCATGCTGCCAACCGG CAGCAAAGACCCGTACGCCCTGCGCCGTGCTGCCTTGGGCGTGCTGCGTATCCTGATCGAGAAGCAGCTGGACCTGAACCTGACCGGTGCGGTCGAGTTC GCGGTCAAGCAGTTCGGTGCCAAGGTCAAGGCTGCCGGCTTGTCGGAGCAGGTGCTTGAATTCATCTTCGACCGCCTGCGTGCACGTTACGAAGACGAAG GTATCGATGTGGCCACCTACCTGTCGGTGCGTGCCCTGCAGCCTGGTTCTGCCCTGGACTTCGACCAGCGCGTACAGGCCGTGCAGGCCTTCCGCAAGCT GCCGGAAGCCGAAGCCCTGGCTGCGGTGAACAAGCGTGTGTCGAACCTGCTGAGCAAAGCCGAAGGCGCCATCGCCGAACAGGTCGAGCCGAAGTACTTC GACAATGCCAACGAGTTCTCCCTGTACTCGGCCATCCAGCAGGCCGACCAGGCCGTGCAACCGATGGCTGCTGCACGCCAGTACAGCGAATCGCTGGCCC GCCTGGCGGCCCTGCGTGACCCGGTCGACGCCTTCTTCGAGGCGGTGATGGTCAACGCCGAAGACGCCAAGGTACGCGCCAACCGTTATGCCCTGCTCAG CCGCCTGCGCGGTCTGTTCCTGGGTGTGGCCGACATTTCGCTGCTGGGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTTGAAACTGCTGATTCTCGACCGTGACGGGGTGATCAACCATGACTCCGACGCCTATATCAAGACGCTGGAAGAGTGGGTACCGATCCCAGGTTCGG TCGAAGCGATCGCGCAGTTGAGCAAGGCGGGCTGGACGGTGGCCGTGGCCACCAACCAGTCCGGTATTGCCCGTGGCTATTACACACTGGCAACCCTCGA GGCGATGCACGCGCGCCTGCGCGCGCTGGTGGCAGAGCAGGGCGGCGAAGTGGGCCATATCGTGTATTGCCCGCACGGGCCGGACGAGGGCTGCGATTGC CGCAAGCCCAAGCCTGGCATGCTGCGGGCCATCGCCGAGCATTATCAGGTCGGCCTTGAGGGCATCTGGTTTGTTGGCGACAGCAAAGGTGACCTGGAGG CCGCCCTGGCCGTCGGTGCACAACCCGTGTTGGTGAAAACCGGCAAGGGCGAGCGGACCCTGGAAAAAGGTGTCCCTGAAACTACACTGATTTTCGACGA
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSAQDFLVELGTEELPPKALASLGEAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQQPDRSINIDGPPLQAAFKDGEPTQAALGFAKKCGVE LAEIDQSGPKLRFSQHIPGKATAGLLPTIVEDSLNDLPIPKRMRWAASREEFVRPTQWLVMLLGDQVVDCTILSQKAGRESRGHRFHHPENVVITTPANY VEDLRKAYVLADFAERRELISKRTAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGKLLPRFITVAN VESRDPKQIVQGNEKVVRPRLTDAEFFFKQDKKQPLETFNERLKNVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRAGRAGLLSKCDLATEMVGEFP EMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLTGAVEF AVKQFGAKVKAAGLSEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQAFRKLPEAEALAAVNKRVSNLLSKAEGAIAEQVEPKYF DNANEFSLYSAIQQADQAVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADISLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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