Pseudomonas sp. LAIL14HWK12:I9, D903_RS0100245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGCCCTCGACCCGCAAACCACGGCTTCGGTCCTGCAATTGCTGGCCGAGATCAACCGTGAGCTGAAGCTGACCATCGTGCTGATCACCCATGAAATGG ACGTGATCCGCCGTGTCTGCGACCGCGTGGCAGTGATGGACGCCGGCCAGATCGTCGAGCAAGGCTCGGTGGCCGATGTGTTCCTGCACCCGCAGCACCC CACCACCAAGCGCTTTGTCCAGGAGGACGAGCAAGTCGACGAAGGCGAACAGCGCGACGATTTCGCCCATGTACCAGGCCGTATCGTGCGCCTGACCTTC CAGGGCGACGCCACCTACGCGCCGCTGCTGGGCACCGTGGCCCGCGAAACCGGTGTGGACTACAGCATCCTCGCCGGGCGTATCGACCGCATCAAGGATG TCCCCTATGGCCAGCTCACCCTCGCCCTGATCGGCGGTGACATGGAAGCGGCATTCGCCCGCTTCAAGGCAGCTGACGTACATATGGAGGTACTGCGTTG
|
|
| DNA Sequence for Gene |
>D903_RS0100245
ATGGACGCCCTGAATTTCTTTGCAAACGTCGACTGGGCCGAAATCTGGCTGGCCACCGTCGATACCATGATCATGTTGTTCGGCTCGTTGTTCTTCACCG TGCTGCTGGGCCTGCCGCTGGGCGTGCTGCTGTTCCTCTGCGGGCCTAAGCAGATGTTCGAGCAAAAGGGCGTGTATGCGCTGCTGTCGCTGGTGGTGAA CATCCTGCGCTCGCTGCCGTTCATCATCCTGCTGATCGTGATGATCCCGTTCACCGTACTGATCACCGGCACCTCGCTGGGCGTTGCCGGCGCCATTCCG CCGCTGGTGGTAGGTGCCACGCCGTTCTTCGCGCGCCTGGTGGAAACGGCCCTGCGTGAAGTGGACCGCGGCATCATCGAAGCTACCCAGTCGATGGGCG CCACCACCCGCCAGATCATCACCAGTGCGCTGCTGCCGGAAGCCCGCCCGGGCATCTTCGCGGCCATCACCGTAACGGCCATCACCCTGGTGTCGTACAC CGCCATGGCCGGTGTGGTCGGTGCCGGTGGCCTGGGCGACCTGGCGATTCGCTTCGGTTACCAGCGCTTCCAGACCGATGTAATGGTAGTGACCGTGGTA TTGCTGCTGGTACTGGTTCAAGTACTGCAGAGCGTGGGCGACAAACTGGTCGTGCATTTTTCCCGTAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCCAATGGGGTCGGCCCGGCCGACCCGTTCGGGGGCCGTCGCGGCCCTCACAAGGAGTGATTGATGAAGAAGCTGCTTGCTGTCGCTGCCGCTGTCGCG GCCTTCTCGGCCCACGCCGATACCCTGACCGTTGCCGCCACCCCGGTGCCGCACGCCGAGATCCTCAACTTCGTCAAACCACAGCTGGCGAAAGAGGGCG TGGAGCTGAAGGTGAAGGAGTTCACCGACTATATCCAGCCGAACGTGCAGGTGGCCGAAAAGCGCCTGGACGCCAACTTCTTCCAGCACCAGCCGTACCT GGATGAGTTCAACAAGGCCAAGGGCACCCAACTGGTGAGCGTAGCCGGCGTGCACATCGAGCCGCTGGGCGTGTACTCGACCAAGATCAAGAAGCTGGAC GAGTTGTCTTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCCTGCTGCTGCTGGACAAGGCCGGTGTGATCAAGCTGAAGG
|
|
| Amino Acid Sequence |
>metal ABC transporter permease
MDALNFFANVDWAEIWLATVDTMIMLFGSLFFTVLLGLPLGVLLFLCGPKQMFEQKGVYALLSLVVNILRSLPFIILLIVMIPFTVLITGTSLGVAGAIP PLVVGATPFFARLVETALREVDRGIIEATQSMGATTRQIITSALLPEARPGIFAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTVV LLLVLVQVLQSVGDKLVVHFSRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|