Pseudomonas sp. LAIL14HWK12:I12, D902_RS0120965
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I12 D902DRAFT_scaffold00016.16_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGAATACCCACCATTCACACACAAAGTACGCACAAGTTATCCACAGGCGCTCGCCTTGCAAAGGCCCCAATACCGCATTATCTTGTATCCCGATCGCAG CGAACCACTAGATGTTGGGGTTCGTGCAAAATCACACACAAAAGTCAACCCGCAAAATCGAGCGATTTCCGGGCTGAACTTCAAGTGATTCCAGCAGCCA AACCGCTCCTGCGGAGGCGACCGAGGCAAGCCCTTACAGGGCCTTGTTCGGGTATGGGTGTTGCAGGCCAGGCCTGACACCCATCAGCAACAGATTTTGG GCTCAGGCCCAGAACCTTTGACTTCGGCCAGGGAGCGGCGAGCTATTGCCCTTATTCCTGAGTCTGTCCCGAAGTCGGTACGCCCGCGCGGGCGGATGCG CATGCATTGCGCATCCCCGCCGGGGCATCGAGCAAGTGGACGGAACGGTGGGCGCCCAAAAGGCGCCTGAACACTATAGAAACTGTGGAGACACCCACCC
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| DNA Sequence for Gene |
>D902_RS0120965
ATGCAAACCGACACAACTCGCGAGAACCCGCAAGCCAAGGTGCCGCAAGCTGCCGATTCCAACCAGGATCTGGCCGCCACCGCCCCTGGCCAACTGCGCG TGATCAAGCGCAACGGCACTGTCGTCCCTTACACCGACGACAAGATCACCGTGGCCATCACCAAGGCGTTCCTCGCAGTTGAAGGCGGTACCGCTGCCGC TTCGTCGCGCATCCACGACACCGTCGCGCGCCTGACCGAGCAGGTTACCGCCACGTTCAAACGTCGCATGCCATCGGGTGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAAGTCGCCCGTGACTACGTGATCTACCGCGACCAGCGTGCCAAAGAGCGTGCCA CCCGCGCCAACACCGATGCCGTGGTCGAGCCGCACCCGTCCATCCGCATCACCCTGGCCGACGGCAGCCTGGCGCCGCTCGACATGGCCCGCCTGAACAC CATCATCAGCGAAGCCTGCGAAGGCCTGGCCGAAGTCGATGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCATCAAGGAC GTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTTGAGCGCGAGCCGAACTACTCGTTCGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGGCCTGGGCTTCCTGAATGTAGCCGACAGCGCCACCCACCACGAAATGGCCGACCTGTACGCCAAGGCTCTGCCGGCCTATGTCGCGAAAGGTATCGA GTTCGAGCTGCTGAACCCTGCCCTGGCTGACTTCGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTCACCTACCTGGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTACGCTTCGAGCTGCCGCAGGTGTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAG AGAAAGACAAGGAAGCCCGCGCGATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCG CCCGCAGCTGTCCAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGCTGTCGAAATTCGCCGGT GGCCTGGGCAACGACTGGACCCCTGTTCGCGCACTGGGCTCCTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTTGTACCGTTCCTGAAAGTGGTCA ACGACACCGCCGTTGCCGTGAACCAGGGTGGCAAGCGCAAGGGCGCCGTATGTGCCTACCTGGAAACCTGGCACCTGGACATCGAAGAATTCATCGAGCT GCGTAAAAACACCGGTGATGACCGCCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCGGACCTGTTCATGAAGCGCGTCTTCGATGACGGCAAG TGGACCCTGTTCTCGCCTTCGGAAGTGCCAGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAGGCCCTGACCGAGTACA ACAAGATCAAGGTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAGATGCTGTCGATGCTGTTCGAGACCGGCCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGTTCGCCGCAGCAGCACGTGGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCA GTCTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCGACGGCAAACTGGACACCGCCAAGCTGCAACGCACCGTTAACACCGCCGTGCGCATGC TCGACAACGTGATCGACATCAACTACTACTCGGTGCCGCAAGCGCGTAACTCGAACCTCAAGCACCGCCCTGTCGGCCTGGGCATCATGGGCTTCCAGGA CGCTCTGTACCTGCAGCACATCGCCTACGGTTCCGATGCTGCGGTCGAGTTCGCCGACAAGTCGATGGAAGCGGTCAGCTACTTCGCCATCCAGGCTTCT TGCGACCTGGCCGATGAGCGCGGTGCGTACGAGACGTTCCAGGGCTCGCTGTGGTCCAAGGGCATCCTGCCGCTGGATTCGCAACAGATCCTGATCGAGG CCCGTGGCCAGAAGTACATCGACGTCGATTTGAACGAGACCCTGGACTGGGCTCCGGTACGTGCCCGCGTACAAAAAGGTATTCGTAACTCGAACATCAT GGCCATCGCGCCAACCGCGACCATCGCCAACATCACTGGCGTTTCGCAGTCGATCGAGCCGACCTACCAGAACCTGTACGTGAAATCGAACCTGTCGGGC GAGTTCACCGTGATCAACCCGTACCTGGTCCGCGACCTGAAAGCTCGTGGCCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTTCGG TGCAGCAGATCGAGCGTATTCCACAAGAGCTGAAAGACCTCTACGCCACTGCGTTCGAAGTGGAAACCAAGTGGATTGTCGATGCTGCCTCGCGTCGCCA GAAGTGGATCGACCAGGCTCAGTCGCTGAACCTGTACATCGCTGGCGCTTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCCTGGTACCGTGGCCTG AAAACCACCTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTCAACGCCGTTTCCAGCGGTGGCGACAGCG CCCCGGTCCAGGCAGCCGGCCCTGCGCCAGTGCCGAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCTGGATGCCGCGCGGGGTGCCCAAGGGTGCCCCGCGCGGCATTTTTGTATCTGCGTCACTGAGAAGCCCTGCCCTTTTCCCGCTGCGTATACGGTTC GGTAAAAGGACTGGACCTCTCTAAAAAGGACGCAAGCCCATGGCGCGGAAAAAAGTGGTAACTCGCAAGATTGGCCGTAACGCAGAAACCGGCCGCTTCA CTTCGGTCGAAGCAGCACGCAAGCAGCCCAAGACGCACATTGTCGAAACGCTGCATACCCACCGCAGCTAATGTTGCCGGGCCTCAGCGCCGGCAAGCCC GCGCTGAGGCCCGTTCGGCTAACACACCCTTTGACAAAAACACCATATGATGTGCCTACAAATTTAAACTGGCACAACATATGGGTTGGCGCTACACTCT CCCCCCGTAGACGAACACAGCCATTTCGTGAACGGACGCACGCAAAACCGGTCGAAAAAGTTACCCTCGCCGGCAACACACGCGCCCCGATCGAAGGTGA
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQAKVPQAADSNQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDQRAKERATRANTDAVVEPHPSIRITLADGSLAPLDMARLNTIISEACEGLAEVDGDLIQRETLKNLYDGVAIKD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLNVADSATHHEMADLYAKALPAYVAKGIEFELLNPALADFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQVFFMRVAMGLALEEKDKEARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTAKLQRTVNTAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGIMGFQDALYLQHIAYGSDAAVEFADKSMEAVSYFAIQAS CDLADERGAYETFQGSLWSKGILPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGDSAPVQAAGPAPVPKACAIDEPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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