Pseudomonas sp. LAIL14HWK12:I12, D902_RS0114290
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I12 D902DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCGTTCATGGACAACACCCCGGCAGACAGCGTGGTGGACTGCGCGGGTCGCGAGGGCCTGATCGTGCTGCGTTCATTCGGTAAATTCTTCGGTTTGG CCGGAGTGCGGCTGGGCTTCGTCGCCGCTGAGCGCAGCCTGCTGTTGCGTCTGGCCGAGTTGCTTGGCCCTTGGACCGTCAACGGCCCGACCCGGGTGCT GGCCCAGGCAAGCTTGGCCGACGAAGCTGCGCAGCGTTTGCAGACTGAACGTTGCGCTGCTGCCAGCAAGCGCCTTGCCACCTTGTTGGCTGGCACAGGC CTGGCGCCAAGCGGCGGTTGTGACCTGTTCCAGTACGTGCGCAGCGAGCGTGCCGCGCCGTTGCATGACTTTCTTGCCCGTCGCGGCATCCTGGTGCGCC TGTTCGAAAACCCTCCGGCCGTGCGCCTGGGGCTGCCCGAGAGTGCGGCCGACGAACAGCGCCTGGCCCAGGCGCTGACCGACTATCAAAAGGAATCGGC
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| DNA Sequence for Gene |
>D902_RS0114290
ATGACCACCCTCATGGTGCAAGGCACCACCTCCGATGCCGGCAAGAGCACGCTGGTGACCGCATTGTGCCGCTGGCTGTTGCGCCAGGGCGTCGCTGTGG TGCCGTTCAAACCGCAGAACATGGCGCTGAACAGCGCGGTAACCGCCGACGGCGGCGAAATTGGCCGCGCTCAGGCAGTGCAGGCCCAGGCGTGCCGGCT GGCGCCGCATACCGACATGAACCCGGTACTGCTCAAGCCCAACAGCGACACCGGTGCCCAGGTGATCATTCATGGCCGTGCGGTCACCAGCATGAATGCG GTGGCCTACCACGACTACAAGGCCATCGCCATGCAGGCGGTGCTTGCTTCGCACCAGCGCCTGAGTGCCGCCTGGCCGGTGGTCATGGTCGAGGGCGCCG GGTCACCGGCAGAGATCAACCTGCGGGCCGGCGACATCGCCAACATGGGCTTTGCCGAAGCCGTCGATTGCCCGGTGATCCTGGTCGCCGACATCAACCG TGGCGGCGTGTTCGCGCACCTTGTCGGCACGCTGGAGCTGCTTTCGCCCAGTGAGCAGGCGCGGGTCAAGGGCTTTGTTATCAACCGCTTCCGTGGCGAC ATCGCCCTGTTGCAGCCGGGGCTGGACTGGCTGGAGCAACGCACCGGCAAGCCGGTGCTGGGCGTGTTGCCCTACGTCACCGATTTGCACCTGGAAGCCG AAGACGGCATCGATGTGCGCCAAGGCGCCAAAAGCGAGCGTGTGCTCAAGGTGATCGTGCCGGTACTGCCGCGCATCAGTAACCACACCGACTTCGACCC GCTGCGCCTGCACCCGCAGGTGGACCTGCAGTTCATTGGCCCGGGCCAGCCGATTCCGGCTGCCGACCTGATCATCCTGCCGGGCTCCAAGAGCGTGCGT GGCGACCTGGCGCAACTGCGCGAGCGCGGTTGGGACAAAGCCATCGAGCGGCACCTGCGCTACGGCGGCAAGCTGATCGGCATTTGTGGTGGCCTGCAGA TGCTGGGCCGTGAAGTGCATGACCCGCTAGGCCTCGAGGGCCCTGCCGGATCGAGCCCGGGGCTTGGCCTGCTGGATTACGCCACGGTGCTTGAGGCCCA GAAGCAGTTGCGCAACGTTGCCGGGGTACTGAACCTTGAAGCGGCCCCGGTTGCCGGTTATGAGATTCACGCAGGCGTCACCACCGGCCCTGGTTTGGAA CAGCCTGCCGTGCAACTGGCTGATGGTCGTTGTGATGGCGCGGTGAGCGATGATGGGCAGATCCTTGCCACCTACCTGCACGGCCTGTTCGAGGGCAGCC ACTCGTGCGCCGCGCTGCTGCGCTGGGCCGGCCTGGAAGATGCCCAGACCATCGATTACGAAGCCCTGCGCGAGCGCGACATCGAGCGCCTGGCCGACCT GGTGGAAAAACACCTGGACACCACGCGCTTGCGCCAACTCTGTGGGGTAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATGCGCAGCCTGATCCTCGGTGGCGCCCGCTCTGGCAAGAGCCGCCTCGCCGAACAGTTGGCCAGTGCCAGTGGCCTGCCGGTGACCTACATTGCCACC AGCCAGCCGCTGGACGGTGAAATGAACGAACGTGTGTTGCTGCACCGCCAACGCCGTCCGGACGACTGGGGGCTGATCGAAGAACCGCTGGCCCTGGCCG CTGTGCTGCGCGCCGAAGCGGCCGAAGGCCGTTGCCTGCTGGTGGACTGCCTGACCCTGTGGTTGACCAACCTGCTGATGCTTGAAGATGACCAGCGCGT GGCTGAGGAACGAGATGCCCTGCTGGTCTGCCTTGAGCAGTTGCCTGGCACCCTGATCCTGGTCAGTAACGAAACCGGCCTGGGCGTCGTGCCCATGGGC GAGCTGACCCGGCGTTATGTCGACCTGGCCGGCTGGCTTCACCAGGCCGTGGCCGAACGTTGTCAGCGCGTTGTGCTGACCGTGGCCGGCCTGCCCTTAA
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| Amino Acid Sequence |
>cobyric acid synthase
MTTLMVQGTTSDAGKSTLVTALCRWLLRQGVAVVPFKPQNMALNSAVTADGGEIGRAQAVQAQACRLAPHTDMNPVLLKPNSDTGAQVIIHGRAVTSMNA VAYHDYKAIAMQAVLASHQRLSAAWPVVMVEGAGSPAEINLRAGDIANMGFAEAVDCPVILVADINRGGVFAHLVGTLELLSPSEQARVKGFVINRFRGD IALLQPGLDWLEQRTGKPVLGVLPYVTDLHLEAEDGIDVRQGAKSERVLKVIVPVLPRISNHTDFDPLRLHPQVDLQFIGPGQPIPAADLIILPGSKSVR GDLAQLRERGWDKAIERHLRYGGKLIGICGGLQMLGREVHDPLGLEGPAGSSPGLGLLDYATVLEAQKQLRNVAGVLNLEAAPVAGYEIHAGVTTGPGLE QPAVQLADGRCDGAVSDDGQILATYLHGLFEGSHSCAALLRWAGLEDAQTIDYEALRERDIERLADLVEKHLDTTRLRQLCGVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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