Pseudomonas sp. LAIL14HWK12:I12, D902_RS0112945
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I12 D902DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTCAGTGGTGCGTTGTTCTGGGGCCTGGCCAGCCTGGGCGGGCACCTGTACAGCAAAGGCACCGAGCTGCCGGAACTGAGCCTGCGCAACGCTGGCGGC CAATCCGTCGCCTTGCACAGCTACCGTGGCAAGCCGCTGGTGATCAACATCTGGGCCACCTGGTGCCCGCCCTGCCGCAGGGAAATGCCGGTGCTGCAAC AGGCGCAAAGCGACTATCCGCATGTGACCTTTCTGTTCGTCAACCAGGGCGAAACCCCGGAAAACGTCAGCACCTTCCTTGCCACCACCGGCCTGAGCCT GACCCATGTGCTGTTCGACGGCACCGGCCTGCTGGCCCAGCGCGTCGGCTCCATGGCCCTGCCCACCACCCTGTTCTACGACGCCGACGGGCGGCTGGTC GGCAGCCACCTGGGCGAGCTGTCCCGGGCCAGCCTGCGCCACGCCCTGGAGCCTTTCGACCGGGCCACCGCGCCCGCCCCTGCCGCACAAGGAAACTGAC
|
|
| DNA Sequence for Gene |
>D902_RS0112945
ATGCGACTGACTGCACTGCTGCCCCTGTCCCTGGCCCTGCTGGCCGCCCCCGCCTTGCAGGCCGAAGAGCTGCCCAAGGCCGTTCAGCAACTGCAAGCCA AGGGCGCCGTGATCAAAGGCAGCTTCGACGCGCCCAACGGCCTGCGCGGTTACGCCGCCGAGTACCAGAACAACGCCCTGGCCCTGTACCTCACCCCCGA CGGCAAGCATGTGCTGGTCGGCAGCCTGTTCGACGAACAAGGCAAGGACCTGAGCGCCGAACCGCTGGAAAAGCTGGTGTATGCGCCGATGAGCAAGGAA ATCTGGGCGAAGATGGAGAAAACCGCGTGGATTGCCGACGGCAAGGCCGATGCGCCACGCAAGGTGTACCTGTTCAGCGACCCGAACTGCCCGTACTGCA ATATGTTCTGGGAACAGGCACGGCCATGGGTGGAATCGGGCAAGGTGCAGTTGCGCCATATCATGGTCGGCATCATCCGCGAGGACAGCCCGGGCAAATC GGCAGCCCTGCTGGCGGCGAAAGACCCGGCCAAGGCATTGCAAGCGCATGAAAAAGCCGGCAAGGCCAGCAAGCTGAAGGCACTGGAGCAGGTGCCGGAG GCCGTGCAGCAGAAGCTGGCGGCGAACATGGCGTTGATGGAAGAGATGGGTTTGCAAGCAACCCCGGCGATTTTCTATCAGGATGAACAGGGCAACTTGC AGAGCCAGCAAGGGGCACCTCGGCCGGAGATGCTGGGCAAAATTCTCGGCAAGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AATACGGGTTGCCTGTGCCGGCCTCTTCGCGGGTTTACCCGCGAGGAGGCCAGTGCAGGTTTACAACCCTTCCAGCTCGGCCATCAGGTCACTGAGCCGG TCGACCTTGTCGTCATCCAGCGCACTGCCCTGCAACCCCTGCACATACTCGGCCAGCTCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGTGGCACGT TCAGTTGCAGCTGTTTCTGCACCCGCGAAGCGATCTGCGTGGCCAGCAACGAATGCCCGCCCAACTCGAAGAAGTTGTCGCGCACCCCCACCCGCTCGGT CTTGAGCACATCGGCCCAGATACCGGCCAACACTTCCTCCAGCTCGTTGCGCGGCGCCTGATAGGCCTGGCTGTGCTGGCCGCCGATGTCGATGGCCGGC AACGCCTTGCGGTCGAGCTTGCCATTGGCGTTGTGCGGCAGGTGGTCGAACCAGCCCCAGTGCAGCGGCACCATGTATTCCGGCAACTCGGCACGAAGGC
|
|
| Amino Acid Sequence |
>dihydroneopterin aldolase
MRLTALLPLSLALLAAPALQAEELPKAVQQLQAKGAVIKGSFDAPNGLRGYAAEYQNNALALYLTPDGKHVLVGSLFDEQGKDLSAEPLEKLVYAPMSKE IWAKMEKTAWIADGKADAPRKVYLFSDPNCPYCNMFWEQARPWVESGKVQLRHIMVGIIREDSPGKSAALLAAKDPAKALQAHEKAGKASKLKALEQVPE AVQQKLAANMALMEEMGLQATPAIFYQDEQGNLQSQQGAPRPEMLGKILGKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|