Pseudomonas sp. LAIL14HWK12:I12, D902_RS0112435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I12 D902DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGACGCACTACGCGGTGGCCCTGCAATACGACCCGGAGAAGGGCGGAGTGGCGCCCCTGTTGCTGGCCAAGGGTACCGATTTCATTGCCTTGAAAATCC GCGAGATCGGCGTGGAGCACAAGGTACAGATCCTCGAGTCGCCAGCACTGGCGCGGGCGATCTATTACTCGACCGAAATTGAGCAGGAAATCCCCGCAGG CCTTTACCTGGCGGTAGCGCAGGTGCTGGCCTATGTGTTCCAGATCCGCCAGTACCGTGCGGGCAAGGGCAAACGGCCAGAGCCGCTGAAAGACGACCTG CCGATCCCGCCAGACCTGCGGCGTGATAGTTGATCTGTTCGCCTCGACACTTTCTGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCGGTCTGACA GGCGCTAAATCCCTCAAGGCATACAAAGTTGGAAGGCTTCTTGCAAAGCCACGCCCAGGCGCCCCCTGTGCGTCAAAGTTTTGCATCAAGAGGACTCGCG
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| DNA Sequence for Gene |
>D902_RS0112435
GTGGATCGCACTCAGTTAATCAGCAACGCCCGTAACAACCTGGCCGGGCTCGGCCGGGGCAACCTGGGTGTGCCGCTGTTGCTGCTGGTGATGTTGGCAA TGATGATGTTGCCGATTCCGCCGTTCCTGCTAGACGTGTTCTTCACCTTCAACATCGCGTTGTCGATCGTCGTGCTGCTGGTGTGCGTGTACGCCCTGCG CCCGCTCGACTTCGCCGCATTCCCGACCATCCTGCTGGTGGCCACGCTGTTGCGCCTGGCCCTGAACGTGGCCTCCACGCGTGTGGTCATGTTGCACGGC CAGGAGGGTCACGGCGCCGCCGGTAAAGTGATTCAGGCTTTCGGTGAGGTGGTAATCGGCGGCAACTACGTGGTCGGTGCCGTGGTGTTCGCCATCCTCA TGATCATCAACTTCGTGGTGGTGACCAAGGGTGCCGGGCGTATCTCTGAAGTGAGTGCGCGTTTCACCCTCGACGCCATGCCCGGCAAGCAGATGGCCAT CGATGCCGACCTCAACGCCGGCCTGATCGACCAGGCCCAGGCCAAACACCGCCGTGCCGAGGTGGCGCAAGAGGCCGAGTTCTACGGCTCGATGGACGGT GCCAGCAAATTCGTCCGTGGGGACGCCATCGCCGGCTTGCTGATCCTGTTCATCAACCTGATCGGCGGCATGCTCATCGGCATGCTGCAGCACGGCATGA GCTTCGGTGACGCCGGCAAGGTGTACGCCCTGTTGACGATCGGTGACGGTTTGGTGGCGCAATTGCCATCACTGCTGCTGTCCACCGCCGCCGCGATCAT GGTCACCCGTGCCTCGGGCTCCGAGGACATGGGCAAGCTGATCAACCGGCAGATGTTCGATTCGCCCAGGGCGCTGGCCGTGTCTGGCGCGCTGATGATC GTCATGGGCCTGGTGCCGGGCATGCCCCACGTGGCATTCCTCAGCCTCGGCTTGTTGGCCGGTGGTGGCGCCTACCTGGTGTGGAAGAAACAACAGAAGA CCAAGTTGCAGGCGCAGCAGGAAGCGCAACGCCAGCAGGACCTGCTGCCCTCGCCTCAGCGTGCGCTGGAGACCAAGGAGCTGGGCTGGGATGACGTCAC GCCGATCGACATGATCGGCCTGGAAGTCGGCTACCGGCTGATTCCGCTGGTCGACCGCAACCAGGGCGGCCAGTTGCTGGCACGGATCAAGGGTGTACGC AAGAAGCTGTCGCAGGACCTGGGTTTCCTCATGCCCACCGTGCACATTCGTGACAACCTCGACCTGCAGCCCAGCGCCTATCGCCTGACCCTGATGGGGG TGATCCTGGCCGAAGCGGAGATCTATCCGGACCGGGAGCTGGCGATCAACCCCGGGCAAGTGTTCGGCACCCTGAACGGCATTGCCGCGCGCGACCCGGC GTTTGGTCTGGAGGCGGTGTGGATCGACGTCGGCCAGCGTTCCCAGGCACAGTCGCTGGGCTACACCGTGGTTGACGCAAGTACCGTGGTTGCCACCCAC CTCAACCAGATCCTGCAGAAGCACTGCCACGAGCTGATTGGCCACGAAGAGGTTCAGCAACTGCTGCAGGTGCTGTCCAAGGCATCGCCTAAACTTGCAG AAGAGCTGGTGCCGGGTGTCATTTCCTTGTCGGGCCTGCTGAAGGTGCTGCAAGCGCTGTTGTCGGAACAGGTGCCGGTGCGCGATATTCGCAGTATTGC CGAAGCCATCGCGAACAACGCTGGCAAGAGTCAAGATACCGCCGCGCTGGTAGCGGCAGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTA GGCGTTGAGTCGGAGCTGCCAGTGATTACCCTGGAGCCAAGGTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAGGGTCAGGAAGAGGGTG TTCTTCTGGAGCCTAGCATGGCCGAGAAGCTGCAACGTTCGCTGATCGAAGCGGCCCAGCGCCAGGAAATGCAGGGCCAGCCGGCCATTCTTCTGGTCGC CGGCCCGATCCGCGCCATGCTGTCGCGTTTCGGTCGCCTGGCTGTACCGAATTTGCATGTTCTGGCGTATCAGGAAATACCTGACAACAAGCAAGTCACC ATCGTTGCCACCGTGGGCCCTAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAGTGGATAATGCAAGTTAAGCGATTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTCCGTGATGAGCTGGGCGCCGATGCCGCGATCATTGG CAACCGCCGTATTGCCGGTGGTGTCGAACTGACGGCCGCGCTGGACTACAAGCTGTCCGCCCTGGCCCCACGCGTGCCCAACGCCGAGCTGGAAGAAGAG CTGCGCAAGACGCACACGCGCATCGCCACCGCTCAGGCCGAGCTGGACCACCGCCAGGACAGCAGTGACAACAACCGCCAATTGTTCGCCGGGCAGTCGC TGACCGCCGCCGAGCCGTTGATCGAGCCGCACGTCGATGCCCCCGAGGCGGCGACTGCTGCCCCGGCCGCTGCGCCAGTAGACCCGCGCCTGTTCGATGC CATGCGCTCCGAGCTGTCGGGCCTGCGCGAGTTGCTGGAAGTGCAGCTCGGGTCGCTGGCCTGGACCCAGTTGCAGGGCAGCAAGCCGCAGCAGGCCAAC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRTQLISNARNNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHG QEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMLIGMLQHGMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKLINRQMFDSPRALAVSGALMI VMGLVPGMPHVAFLSLGLLAGGGAYLVWKKQQKTKLQAQQEAQRQQDLLPSPQRALETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVVATH LNQILQKHCHELIGHEEVQQLLQVLSKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVRDIRSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIV GVESELPVITLEPRLEQILLNSLQRAGQGQEEGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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