Pseudomonas sp. LAIL14HWK12:I12, D902_RS0110250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I12 D902DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTACTGGCCAGCAGCAAACCCACCGCTACGACGCCGTGATCCTCGCCACCGGCTACGAGCGCCGCTCGCACCGTGACCTGCTGGCGCCATTGGCCGGTTA CCTGGACGACTTCAGCGTCGACCGCAACTACCGCGTGCTGGCCAGCCCCGACCTGCAGGCCTCGGTGTACTTGCAGGGCTTCTGCGAAAACAGCCACGGC CTGAGTGACACCCTGCTCTCGGTACTGCCGGCCCGTGCCGCAGAAATTGGCCGCGCCCTGTATCAGGACCTGGCGCAATTGCACGGCAAAGCACAACCCG CTGCGGCCCTGACCCGCGCCTGACCCCTGTGCTAAGCACCCTCAAGGCCGGCCTGTCGCTTCTCGCGCAGGTCGGCCTTGTGCTGCCTGAAACATTTGCT TGCATTTAAAACGGCAGGTTTTCGATTCTCATTCGTCCTTATCAGTACAGCCCTCTTTGGTTGGGCACACGCTCGACCACCCATTGCAGAAGACCGTCTG
|
|
| DNA Sequence for Gene |
>D902_RS0110250
ATGGCCAAATCACCGAAAAAATCCAAATCCAGGCTGTGGTTCCTGGTGCATAGCTGGCTCGCCTTGCCAATCTGGTTCTTTGTGCTGATCGTGTGCTTCA CCGGCATGCTCGCCGTGGTCAGCCAGGAAATCGTCTGGCTGGCCAACCCGGACGTACGCGCGAGCAAGCCCGACGGTGATGCCGAGCGCCTGAGCTTCCA GCAGGTACTGGACGCCATGCGCAAAGCCGAGCCAGACATGTTCGTGGAGTCGCTCAGGCGGCCTGACGGCTCGCACTTTGCCCTGCTGGCCGATGTCACA TACCCCGACGGGACCAGCCCGACGCTGTACGTCAATCCCTACACCGGCGTCATCCAGGGCAAGTCCCCTGACTTCAACTTCGAAGCCTTTACCCGTGCAT TGCATGGCTGGTGGCTGGTGCCGTTCACCAATGGTTTCAGCTGGGGCTGGTACCTGGTTTCGCTTCTCGGCCTGCCCATGCTGGCCTCTCTGGTCACCGG GCTGGTGGTGTACAAGAAGTTCTGGAAAGGCTTCTTCAAACCGGTGCGCACCGGGCACGGCTCACGTATTTTCTGGGGCGACCTGCATCGCCTGGCGGGG GTGTGGTCGATCTGGTTCATCGCGGTCATATCCATCACCGGCACCTGGTTCCTGATCCAGGCGCTGCTTTCGGACAACCACATCACCATTTCCAGCCGGC CTATCGTGCCGGTGATCGCCCGTGAAGATGTGCCGCAAATGCCGGATGGCACGCCTGCCCCGCGCATTGACCTCGATGAGGCGGCACGTATCGCCGGCCT GGCGATTCCAGGCCTGGACATTACCTTCATTTCGTTGCCGGCGACCGCCTACAGCCACGTCTCCATGGGCGGGCGCGGCTGGTATCCGCTGATGTTCCAG AGTGCAGCGGTCAACCCTTACACAAGCAACGTCGACAGCCAGTTCCTGCTCAGCGACCGCTCCACGCTGGAATTCGTCACCGAGTCCATGCGCCCCTTGC ACACCGGTGACTTTGGCGGTTTGCCCATCAAGCTGATCTGGTTCTTCTTCGGCCTGGTACTCACCTTGATGGTGCTCAGCGGCTTGCTGATCTGGACCAA GCGTACCGCCCAGGCCACCGCAGCCGCCCTCAAGCGCAGCGACCGTGCTCCCCGTGCCGCACGCAGCCAGACCACACTGGAGACCCAACCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCACGCCCAGGCCGTGCCCGCCAGCCCGCTGAAGCAGTGGTGGCTGAAGTGGCGCTTTCATCTGAACATCCTGCTGATCCTCGTCCCGCTGGGCTTCAT GCCCAAGTATTTCAGCGACGCCAAGCTGTTTCGTGGCGACGCCGGCCTGGGGGCGAACGTGGTCAGTGGCATCCAGGCCGGCCCTTACACGCTGGACTTG GCTGAATTGCGTGACGAAGCACCACGCGAAGACGGCCCCGCCGGCCACTTCAAGTCCTTCAGCGCGTCCCTGTGCAAAGCCTGCATGAAAGACGTCAAGG CCGTTTACCTGCGCATCGGCAAACCCCGCAGCCTGCGCGCTGCCGGCACCATCTTCTTTGGCGCCCCCTACCGCATGGGCACCAACCTGCCCATCCCGCC GCGTACCAAACCCGACGCGCAAATCTGGATCACTCTGGAAGGTTGGGACGGCAGCATGCACCAGGCATCCGTCCCCCTGGCCAAGGCATCGCCTGCCACC
|
|
| Amino Acid Sequence |
>peptidase
MAKSPKKSKSRLWFLVHSWLALPIWFFVLIVCFTGMLAVVSQEIVWLANPDVRASKPDGDAERLSFQQVLDAMRKAEPDMFVESLRRPDGSHFALLADVT YPDGTSPTLYVNPYTGVIQGKSPDFNFEAFTRALHGWWLVPFTNGFSWGWYLVSLLGLPMLASLVTGLVVYKKFWKGFFKPVRTGHGSRIFWGDLHRLAG VWSIWFIAVISITGTWFLIQALLSDNHITISSRPIVPVIAREDVPQMPDGTPAPRIDLDEAARIAGLAIPGLDITFISLPATAYSHVSMGGRGWYPLMFQ SAAVNPYTSNVDSQFLLSDRSTLEFVTESMRPLHTGDFGGLPIKLIWFFFGLVLTLMVLSGLLIWTKRTAQATAAALKRSDRAPRAARSQTTLETQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|